Gene
| Gene Model ID | pfu_aug2.0_1164.1_14827 |
|---|---|
| Locus | scaffold1164.1 : 8278 ... 15655 : - |
| To GenomeBrowser | scaffold1164.1:8278..15655 |
| Genes list of scaffold | scaffold1164.1 |
| Synonym | pfu_aug1.0_10700.1_68235 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1164.1_14827.t1 | 1 | 1 | TYW3 | 7 | 116 | 9.8e-30 | 103.2 | 2.0e-33 | 1.5e-29 | 102.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1164.1_14827.t1 | gi|676436983|ref|XP_009048056.1| | hypothetical protein LOTGIDRAFT_157605 [Lottia gigantea] | 4.0e-39 |
| pfu_aug2.0_1164.1_14827.t1 | gi|585720148|ref|XP_006813030.1| | PREDICTED: tRNA wybutosine-synthesizing protein 3 homolog [Saccoglossus kowalevskii] | 2.0e-36 |
| pfu_aug2.0_1164.1_14827.t1 | gi|524876050|ref|XP_005094745.1| | PREDICTED: tRNA wybutosine-synthesizing protein 3 homolog [Aplysia californica] | 1.0e-35 |
| pfu_aug2.0_1164.1_14827.t1 | gi|390360105|ref|XP_003729633.1| | PREDICTED: tRNA wybutosine-synthesizing protein 3 homolog [Strongylocentrotus purpuratus] | 1.0e-32 |
| pfu_aug2.0_1164.1_14827.t1 | gi|147899948|ref|NP_001087853.1| | tRNA wybutosine-synthesizing protein 3 homolog [Xenopus laevis] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_1164.1_14827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14827.t1 atgacaaagcaaaccaccagtattgcaaaaaagaaaggatgtaaatggctgtatactagtcatgactttgcagattacca gcaagttttagagtcatcattagctgttactggtgatgcagtctttaagtttgagccgtttgtactacatgttcagtgta ggaccctggagcatgctcagacactgctgagctgtgctgttggtgctggatttaggaattctgggatcagcatcggaaat aagggaaaattcattcttggtgtaagaagtacacactcattagaagttccgatatcctcaaatggtcagttgctggtaca agatcattatttcaaaagcatacatacattttgtactttatctgaatacattttctttctttgtagatttttccaaaatg taaaggactacgtggaaagctgttcaaaggtggaaagatgccaaggaaagtctgacaaaagaagcaaaaaacttaaaaca aagaaggataacttagatttctctattattacccaaaccacaaattctacggtagaaaagaataacttagtagaagatat ggacttgacttcatcatatctgtttgatatgctagatgctacctaa |
|
Protein
| Protein ID | pfu_aug2.0_1164.1_14827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14827.t1 MTKQTTSIAKKKGCKWLYTSHDFADYQQVLESSLAVTGDAVFKFEPFVLHVQCRTLEHAQTLLSCAVGAGFRNSGISIGN KGKFILGVRSTHSLEVPISSNGQLLVQDHYFKSIHTFCTLSEYIFFLCRFFQNVKDYVESCSKVERCQGKSDKRSKKLKT KKDNLDFSIITQTTNSTVEKNNLVEDMDLTSSYLFDMLDAT |
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