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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1164.1_14830
Locus scaffold1164.1 : 73757 ... 82465 : -
To GenomeBrowser scaffold1164.1:73757..82465
Genes list of scaffold scaffold1164.1
Synonym pfu_aug1.0_147670.1_71861

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1164.1_14830.t1 gi|557024529|ref|XP_006012443.1| PREDICTED: meteorin-like protein-like [Latimeria chalumnae] 4.0e-25
pfu_aug2.0_1164.1_14830.t1 gi|558172048|ref|XP_006125288.1| PREDICTED: meteorin-like protein-like [Pelodiscus sinensis] 6.0e-25

Transcript
Transcript IDpfu_aug2.0_1164.1_14830.t1
Definition-
>pfu_aug2.0_1164.1_14830.t1
atggaactgtacctggggaaggtgatgaacctggtgacaatatttactgcagtattacaaggatttgctcacgaaatatg
tgaatcatgtgattgttcattaagtgacctcccaaattcagatcatggagttcgcagcgtgaagacgatgtgcgacgagg
ggaccatagaatggtacagtccatacggggcgctcagcatcgagctcaagtatagcagatccggtagctaccgcgcatgc
ttcgtgatagaaagtgtcaatactgaactccaagtatctcaagaatcctggaagaattctaagtttccattatctcatag
acttccgccagcggcatctttgaaacctttagtgagcattaatggcaaacataaagagttttgtgtgacgtcatcaactc
cggtgatactatatttagaaccagttaggactcagtacatgtctggtctttcacatgtaaagtttcagtatttattagaa
tctagaaattacaaggcagaattggatccaattgaagaatgtcggccttgtaataaagcagagttaataatggcatactg
ttcaagtgattttgttatagagggacgcatggcaaatgtgacgcataaagatgaggaaagcaaatcgtacgttggcgtgc
atgtgtcacgcgtgatccgccagcgtgacactacactcttttacagaccgtaccgtgacagcaaagaactttacggtcac
gtggtcattccaaggcattgtgaggcaaagaaaagcaaaggcacatttttattcgcgggaaaagtgcggttcggagaatt
gacaaaatcttgctcattatatttggacgattgggagagaatcgcagcaaatgcaataaaagatggtgatatgttgtgta
cgttgaaatga

Protein
Protein IDpfu_aug2.0_1164.1_14830.t1
Definition-
>pfu_aug2.0_1164.1_14830.t1
MELYLGKVMNLVTIFTAVLQGFAHEICESCDCSLSDLPNSDHGVRSVKTMCDEGTIEWYSPYGALSIELKYSRSGSYRAC
FVIESVNTELQVSQESWKNSKFPLSHRLPPAASLKPLVSINGKHKEFCVTSSTPVILYLEPVRTQYMSGLSHVKFQYLLE
SRNYKAELDPIEECRPCNKAELIMAYCSSDFVIEGRMANVTHKDEESKSYVGVHVSRVIRQRDTTLFYRPYRDSKELYGH
VVIPRHCEAKKSKGTFLFAGKVRFGELTKSCSLYLDDWERIAANAIKDGDMLCTLK

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