Gene
| Gene Model ID | pfu_aug2.0_1164.1_14832 |
|---|---|
| Locus | scaffold1164.1 : 113667 ... 142945 : - |
| To GenomeBrowser | scaffold1164.1:113667..142945 |
| Genes list of scaffold | scaffold1164.1 |
| Synonym | pfu_aug1.0_6346.1_67424 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1164.1_14832.t1 | 1 | 1 | NYN | 118 | 216 | 7.0e-11 | 42.6 | 7.0e-14 | 1.7e-10 | 41.3 |
| pfu_aug2.0_1164.1_14832.t1 | 1 | 1 | Limkain-b1 | 238 | 316 | 3.1e-20 | 71.7 | 4.1e-23 | 1.0e-19 | 70.0 |
| pfu_aug2.0_1164.1_14832.t1 | 2 | 1 | RRM_5 | 271 | 304 | 2.2e-10 | 40.2 | 8.3e-07 | 0.002 | 17.9 |
| pfu_aug2.0_1164.1_14832.t1 | 2 | 2 | RRM_5 | 752 | 804 | 2.2e-10 | 40.2 | 2.6e-07 | 0.00065 | 19.4 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 1 | OST-HTH | 851 | 869 | 7.7e-32 | 108.9 | 2.2 | 5500.0 | -2.8 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 2 | OST-HTH | 930 | 961 | 7.7e-32 | 108.9 | 0.8 | 2000.0 | -1.3 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 3 | OST-HTH | 1022 | 1081 | 7.7e-32 | 108.9 | 5.5e-10 | 1.4e-06 | 28.0 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 4 | OST-HTH | 1084 | 1112 | 7.7e-32 | 108.9 | 0.14 | 350.0 | 1.1 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 5 | OST-HTH | 1188 | 1252 | 7.7e-32 | 108.9 | 2.4e-12 | 5.8e-09 | 35.6 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 6 | OST-HTH | 1264 | 1324 | 7.7e-32 | 108.9 | 0.029 | 72.0 | 3.3 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 7 | OST-HTH | 1340 | 1378 | 7.7e-32 | 108.9 | 0.0011 | 2.8 | 7.8 |
| pfu_aug2.0_1164.1_14832.t1 | 8 | 8 | OST-HTH | 1405 | 1461 | 7.7e-32 | 108.9 | 3.5e-08 | 8.8e-05 | 22.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1164.1_14832.t1 | gi|557285735|ref|XP_006025649.1| | PREDICTED: meiosis arrest female protein 1 homolog isoform X2 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_1164.1_14832.t1 | gi|719759827|ref|XP_010215963.1| | PREDICTED: meiosis arrest female protein 1 isoform X3 [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_1164.1_14832.t1 | gi|224070088|ref|XP_002195974.1| | PREDICTED: meiosis arrest female protein 1 [Taeniopygia guttata] | 0.0 |
| pfu_aug2.0_1164.1_14832.t1 | gi|557285733|ref|XP_006025648.1| | PREDICTED: meiosis arrest female protein 1 homolog isoform X1 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_1164.1_14832.t1 | gi|530641804|ref|XP_005307627.1| | PREDICTED: meiosis arrest female protein 1 isoform X3 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1164.1_14832.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14832.t1 atggcgtgtttatcccggattgcatgcatgcaaccctcccatttaccaagatacacaaaggtgttccaagacgttaatcc agataggacggagaatcatcaggacccagcttttattgatgaattttggacctatgatggagttccgtcatcacggtatg agagtgccatattgtcagataacgatggcgtggagcagacgttacttgctgaatttatcgctaagatgaatccagtggaa gtttgggtccctttcttgtcacacttcttcaagccaatacagatgctccctttcaaccccttagaattttatcactcatt tataattaccatgtcaaaccaactgccacccattggtgtattttgggacatagaaaattgttctgtacctaaatggaagt ctgccttaagtgttgtccaactgatcagagagaagttcttcgcagaccacagggaggtggagtttatgtgtgtgtgcgat acaactaaagagagtaaagatgtaatacaggaactcaacaatgcacaggtcaatgtagtgcacataaatgccaccagcaa gaatgcagctgatgataaattacgtcagagtctgcgacgttttgcagacaacaacactccccctgcttcccttgtcctca tctcaaatttagttggggatcttccacagagaactgctgaagggaattctgatgacggcacagagttggaagtttttgac taccctattcacatacctccaaagaaaatccaccgcagactgaagacgatctccgttaactgtggagggcgtgtcatcag cgtcacagagagggtagctgtcgtcagatttgcctgccataatgatgctgctaaggccaagaagagaatggaaggagagg atgtgtacggcggtaaaataaaagtcaagttcccagataccgacgataaagaagaacgcaaagaaagcagaactgatact gatgatgatgttgatacaacatcatctgcatcagttcttccttctgaattacgtaatatcatacttgaaaggaggtcaga ttcacgtcaaaggaaaaaaaatggaggagttgcgagcacaagaattgttaacggatggacagacggacggacgctggaca acggggtatcgcataagctcgactggtcagagaccagtagagctaaaaatcgctgcaaacagttacatattgtgttttgt cttttgatagatctcatacaccatacaattggtgatgataaatctttaaaaaaaaatgtaatgatcgctgagctatattc tgaccatttcggaaaacctcagcaggataaaccattctcacagttcgataattctgaccatttcggaaaacctcagcagg ataaaccattctcacagttcgatagtaaacatagtaaagaggattcaaagaatgtaggaaagtcaaacgggaataaaggg aagaacaaaggcaaaaagaatgctgaaaatcaaggatctaatgatgactctataaacactaataataataaaacttcaac gcaaagtcaaaaccaggaaactgcctcccccaacaaccttcagaatgttgtgaataaatttgccaaggacaaaaaaggga gtcgtcaagtgttaatgttacagcagcaactgtatcaagaaggccaagaaaaaccgtcgttgtccgattccgagatgaac aggtacaatagctatcagcagagcaccacctaccaatataaccaaagtggaggaggtggttatcaacactaccaatccta ctacaaccaacaacggtacaatgttcccaactccggtcaagcaaccagcagcttttaccattatggctcggcccataacc agagttttagcacgtacagtgcgtacaagagtttatatgaaggcaatggcagcaactataggaataagaagtatatgaac aatggttacggcaatgcaaataaccatattccgtaccacaaccataatcagcagcagcagcaaggtgggggttgcgtccc ttttaatccaggtccgtacaatgtcccacccccaggttattgcagtgaaggggaggggactcagcctgctttctccaaaa acaccttttgtcctatcacttccccctccccctgccccagcactagcagcagttcttcatgtgaacagatggacagtgca gactgggactctatctcaggacctgtagagttactagtctccaaccttgactataacatcagtgctaaggagtggcggaa aattctctttacgaccttccatcctcatgtcagggttttgaatgtacatgtaaagacacagccagacaacaccagcctgg gtatggtaaagattccgagtgtagaggaggcacgcttcgcaatatcccagttccatcgtaagaaaatcggctataaaagg atccatgttacactcaagactgaggattctcagagacctgcatctagcacaaaggcagaagccatggcattgttatctga agctaaaggaaatgttctgcctctctttaaattcattgaactatttgataaaaggtatcacaggtcaattagtgtgtcag aactatacaagatgagggacaccatagacataagagagcagggaggggccggtagaatggtgtacctcgccaacagtcct cagtccacctcccctaacctggagggtcaggatgcagaaggctcggagattttagaacagccagcgtgtcatcgtcattg tccagagggaagtccggcttatgcagaggcagtcaatagttgcatgctaccgaacgttaaagtccgtttaaagacatttg caactcaagttcacattctgttgcagtcacatgagggaaatatgcccctgatgagttttccagcctgttacagtcatgaa tgtgggcccctgcctatctctatggagggaggagtgccgttagaacatttgataagctgtgtgccgggcatacaaataca ggtgtctccatctggtgtgaaaaagattcagtgggcagaaaacaggccacccgctcccacagattcttcacgcctgtgta ccagtcctttgttaagtcagcagttgaaccagttcagtcgtgagatgatagatttgttgaagcagcagccccagggccgt atgccgtttagtaagtttataccaacctaccatcatttctttggacggcagtgtcgagtggccgactacggttacaacag actcaaggacttgtttgaagcagtacctcatgttgtacagtgtattaatagacttggcaagcctcacgcttccatgttca ataagagatgggacgtaacagaatatggcatggcgtatctggacgatttactatctgaagtcccctcgtcctccatagct gtcattcaggaaggaaatgagagtattgtagccatccccaaaaaagaccaatctcaggaggaggtagagaggaccaagca gtttgcgttggaggtagtggacctactgaaacataatccccagtgtcgtatgccctttaacaagtttatcccggcctatc accaccattttgaccaatctcaggaggaggtagagaggaccaagcagtttgcgttggaggtagtggacctactgaaacat aatccccagtgtcgtatgccctttaacaagtttatcccggcctatcaccaccattttggtaggcagtgtagagtatcgga gtacggctttacaaaactggtggatctgtttgaggcaatccctcatgtggtagagattgaagaagagagtgaggagagac tgatccacctaacggagcctgagctcagaaaagttctggcggagcagctggtaacgctacttaacgtccagaagaaccag tgtataccacttcaccacctgatgtctgcctttacttgtcatttcggcttcaatataccactgtacgatttcaatgtgga ctcggaggaagaactactgaccaaactgaagcatgtagtaaaggtggagaaagtaaacaggtgtaaatatgtgaaactag aagacagaagtgagacccctcaactggctcatcaagttctacaactcttgatggaccacagcgggggtagtctccccttg atggagctctgcagtagatacaaatctatttatggtgtggactgtgacatcaagaccatcaaagatgaacttctagattt tgtacaggttacaggagacgacgagtctgcagtcatcagtctaacggcgctacaggcctttgccagggacgtcaggatct tactatacatacattctaagctactcatctcagactttgagagggtctataaggaacactttggggtagagattaagcca gcattatatggctgtcctacgatcactgcactgttggaatccataccccacgttgtaaccttcagtggtaaaggactaca cagagtggtgcagttgtcggctaatgttacaggtttgccatgtagccgtaagccatcatattcaccctcggccatggatt ctgatacccagtctagtgattctggggttacagatactcatcctgaagttgaggacattatgaagcacgagtgtatgaca gccaaatcatccagcctcctggagggtcccgtaccgtcagccattccctcaccggaccttagacctgttgtccaatcaga gacagacctgatgaagtttgaaactgtggctgttgaggacattatgaagcacgagtgtatgacagccaaatcatccagcc tcctggagggtcccgtaccgtcagccattccctcaccggaccttagacctgttgtccaatcagagacagacttgatgaag tttgaaactgtggctgatttggttgaaaaactgatgaccttgagtgaggaggaaaaaaagggacagaaaacgcccctttg tcggacacctacctccgagttgttacaacttgccgctcagtgtctgctctccaggcctccctctactgaaccagaggtca aggacactccagagagcaaaggtcagactggtgagaaaggtagctcctcaaaaggaataaaagacgagtctcaggtcaag gtcagtgacgaaaagggatggtggaaagtaggtcaagatcaggtcaaagatgaagagacattggctgacaaggccaagaa ggagagcttcgaaaagacggagcaggagaaaattttgagggaggctatcttcactcatctaaagaaagaagttgaaagtc gaagggacagtaaggtaaaggaatctacaccttcatctgaagggtttgtaggcaaattggttgagatgaaaataccgaca gcacctactggaaagttcctgaatcgttcagccgacagtgtatcatacgataatatgtttcgtcaggatctgccgctgga aacgagctcggtgaagtccgactccagcacacttagcgacagatcacaggagtctcctagaaaatcgcctcgaaaaccga ggatcgctgcaaaattccctgttcgcatagacatgggaaattaa |
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Protein
| Protein ID | pfu_aug2.0_1164.1_14832.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14832.t1 MACLSRIACMQPSHLPRYTKVFQDVNPDRTENHQDPAFIDEFWTYDGVPSSRYESAILSDNDGVEQTLLAEFIAKMNPVE VWVPFLSHFFKPIQMLPFNPLEFYHSFIITMSNQLPPIGVFWDIENCSVPKWKSALSVVQLIREKFFADHREVEFMCVCD TTKESKDVIQELNNAQVNVVHINATSKNAADDKLRQSLRRFADNNTPPASLVLISNLVGDLPQRTAEGNSDDGTELEVFD YPIHIPPKKIHRRLKTISVNCGGRVISVTERVAVVRFACHNDAAKAKKRMEGEDVYGGKIKVKFPDTDDKEERKESRTDT DDDVDTTSSASVLPSELRNIILERRSDSRQRKKNGGVASTRIVNGWTDGRTLDNGVSHKLDWSETSRAKNRCKQLHIVFC LLIDLIHHTIGDDKSLKKNVMIAELYSDHFGKPQQDKPFSQFDNSDHFGKPQQDKPFSQFDSKHSKEDSKNVGKSNGNKG KNKGKKNAENQGSNDDSINTNNNKTSTQSQNQETASPNNLQNVVNKFAKDKKGSRQVLMLQQQLYQEGQEKPSLSDSEMN RYNSYQQSTTYQYNQSGGGGYQHYQSYYNQQRYNVPNSGQATSSFYHYGSAHNQSFSTYSAYKSLYEGNGSNYRNKKYMN NGYGNANNHIPYHNHNQQQQQGGGCVPFNPGPYNVPPPGYCSEGEGTQPAFSKNTFCPITSPSPCPSTSSSSSCEQMDSA DWDSISGPVELLVSNLDYNISAKEWRKILFTTFHPHVRVLNVHVKTQPDNTSLGMVKIPSVEEARFAISQFHRKKIGYKR IHVTLKTEDSQRPASSTKAEAMALLSEAKGNVLPLFKFIELFDKRYHRSISVSELYKMRDTIDIREQGGAGRMVYLANSP QSTSPNLEGQDAEGSEILEQPACHRHCPEGSPAYAEAVNSCMLPNVKVRLKTFATQVHILLQSHEGNMPLMSFPACYSHE CGPLPISMEGGVPLEHLISCVPGIQIQVSPSGVKKIQWAENRPPAPTDSSRLCTSPLLSQQLNQFSREMIDLLKQQPQGR MPFSKFIPTYHHFFGRQCRVADYGYNRLKDLFEAVPHVVQCINRLGKPHASMFNKRWDVTEYGMAYLDDLLSEVPSSSIA VIQEGNESIVAIPKKDQSQEEVERTKQFALEVVDLLKHNPQCRMPFNKFIPAYHHHFDQSQEEVERTKQFALEVVDLLKH NPQCRMPFNKFIPAYHHHFGRQCRVSEYGFTKLVDLFEAIPHVVEIEEESEERLIHLTEPELRKVLAEQLVTLLNVQKNQ CIPLHHLMSAFTCHFGFNIPLYDFNVDSEEELLTKLKHVVKVEKVNRCKYVKLEDRSETPQLAHQVLQLLMDHSGGSLPL MELCSRYKSIYGVDCDIKTIKDELLDFVQVTGDDESAVISLTALQAFARDVRILLYIHSKLLISDFERVYKEHFGVEIKP ALYGCPTITALLESIPHVVTFSGKGLHRVVQLSANVTGLPCSRKPSYSPSAMDSDTQSSDSGVTDTHPEVEDIMKHECMT AKSSSLLEGPVPSAIPSPDLRPVVQSETDLMKFETVAVEDIMKHECMTAKSSSLLEGPVPSAIPSPDLRPVVQSETDLMK FETVADLVEKLMTLSEEEKKGQKTPLCRTPTSELLQLAAQCLLSRPPSTEPEVKDTPESKGQTGEKGSSSKGIKDESQVK VSDEKGWWKVGQDQVKDEETLADKAKKESFEKTEQEKILREAIFTHLKKEVESRRDSKVKESTPSSEGFVGKLVEMKIPT APTGKFLNRSADSVSYDNMFRQDLPLETSSVKSDSSTLSDRSQESPRKSPRKPRIAAKFPVRIDMGN |
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