Gene
| Gene Model ID | pfu_aug2.0_1164.1_14833 |
|---|---|
| Locus | scaffold1164.1 : 143816 ... 155552 : + |
| To GenomeBrowser | scaffold1164.1:143816..155552 |
| Genes list of scaffold | scaffold1164.1 |
| Synonym | pfu_aug1.0_4150.1_66896 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha methylacyl- | GO:0003824 GO:0008152 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1164.1_14833.t1 | 1 | 1 | zf-C3HC4_3 | 67 | 109 | 7.9e-06 | 25.4 | 1.4e-08 | 1.6e-05 | 24.4 |
| pfu_aug2.0_1164.1_14833.t1 | 1 | 1 | zf-C3HC4 | 68 | 103 | 5.0e-10 | 38.8 | 1.1e-12 | 1.2e-09 | 37.6 |
| pfu_aug2.0_1164.1_14833.t1 | 1 | 1 | zf-RING_2 | 68 | 103 | 5.6e-10 | 38.8 | 1.1e-12 | 1.3e-09 | 37.7 |
| pfu_aug2.0_1164.1_14833.t1 | 1 | 1 | zf-C3HC4_2 | 68 | 103 | 1.2e-08 | 34.8 | 2.5e-11 | 2.9e-08 | 33.6 |
| pfu_aug2.0_1164.1_14833.t1 | 1 | 1 | zf-RING_UBOX | 68 | 103 | 6.9e-06 | 25.6 | 1.2e-08 | 1.4e-05 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1164.1_14833.t1 | gi|676431181|ref|XP_009046166.1| | hypothetical protein LOTGIDRAFT_171720 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1164.1_14833.t1 | gi|260810885|ref|XP_002600153.1| | hypothetical protein BRAFLDRAFT_118249 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1164.1_14833.t1 | gi|585651440|ref|XP_006814746.1| | PREDICTED: E3 ubiquitin-protein ligase LNX-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1164.1_14833.t1 | gi|449682880|ref|XP_004210207.1| | PREDICTED: E3 ubiquitin-protein ligase LNX-like [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_1164.1_14833.t1 | gi|675847188|ref|XP_009009154.1| | hypothetical protein HELRODRAFT_63257 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1164.1_14833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14833.t1 atgaatccggtggttgtcacgacgaaccccctccaaataacaaggtcgaagttagtcagaataaccctgaacccagggtt tgacggtggggctgattttggattgttcacacccataatgccaaaaaggaaggaatgctcgggagacactgatgtggaaa ggtattttctgaatccagagtctgtgagtgtacatttatactgttccatatgtcaggatgtattttgtgaaccacagagg gctccgtgtggccacagcttctgtaaaaagtgtattttgccatggctaaggaacagtaaaacttgtcctgaagataggaa gcgagttactccaggagagttacatcatgacttcattttggaaaatatcataggtgatcagatggtggcatgtccatacc gagggactgggtgtgagtttgtaggacagttacagatgctctcatctcataaaaagtcttgtgattttaatccggataac ctccctgattttctgcgaaagccatctccacatgaaactgaatgttcaccagcccatccttatgaggacgatggtagtgt ccctacactaggaaaaccttcattgaaaatgagactattccgggccagtgaaagtcagaaaaaacttcttatatctatgt ttgacgaaaaggaggacaagaaatga |
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Protein
| Protein ID | pfu_aug2.0_1164.1_14833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14833.t1 MNPVVVTTNPLQITRSKLVRITLNPGFDGGADFGLFTPIMPKRKECSGDTDVERYFLNPESVSVHLYCSICQDVFCEPQR APCGHSFCKKCILPWLRNSKTCPEDRKRVTPGELHHDFILENIIGDQMVACPYRGTGCEFVGQLQMLSSHKKSCDFNPDN LPDFLRKPSPHETECSPAHPYEDDGSVPTLGKPSLKMRLFRASESQKKLLISMFDEKEDKK |
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