Gene
| Gene Model ID | pfu_aug2.0_1164.1_14834 |
|---|---|
| Locus | scaffold1164.1 : 165530 ... 171685 : - |
| To GenomeBrowser | scaffold1164.1:165530..171685 |
| Genes list of scaffold | scaffold1164.1 |
| Synonym | pfu_aug1.0_4150.1_66895 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| opsin- partial | GO:0004871 GO:0007165 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1164.1_14834.t1 | gi|736197014|ref|XP_010773103.1| | PREDICTED: opsin-3-like, partial [Notothenia coriiceps] | 1.0e-13 |
| pfu_aug2.0_1164.1_14834.t1 | gi|700435380|ref|XP_009956687.1| | PREDICTED: opsin-3-like, partial [Leptosomus discolor] | 2.0e-13 |
| pfu_aug2.0_1164.1_14834.t1 | gi|696981847|ref|XP_009559522.1| | PREDICTED: opsin-3 [Cuculus canorus] | 2.0e-13 |
| pfu_aug2.0_1164.1_14834.t1 | gi|704300395|ref|XP_010162681.1| | PREDICTED: opsin-3, partial [Caprimulgus carolinensis] | 3.0e-13 |
| pfu_aug2.0_1164.1_14834.t1 | gi|699576544|ref|XP_009876499.1| | PREDICTED: opsin-3, partial [Apaloderma vittatum] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1164.1_14834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14834.t1 atgactttgacatttttggtcacgtggttaccttatgccatcatttccctcgtatttgctttcggcttttctttcgagtc tcctgtagttatattgccaacaatgttcgcaaaatcatcatgcgcatacaatccatttatatactgtttcacacacgaaa agtttcgcgatgctgttctgaagatattttgcaacaggaaaaacaaagtacatatcggggacgaaaggaatgaaagtcta ccatggagaaccgaagaacgagaagcaactgtgtcttaccataggtgggtaggagctaggaacatgttcacagcatcgtc gttccaagacggaaccgactgttcgtgttcccagaaatacattcttcaagaggacatagtaagaatacacatggaaccgc gtgctccagtcatggaagctggtcaaattatgacagaattttccaatttctaa |
|
Protein
| Protein ID | pfu_aug2.0_1164.1_14834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1164.1_14834.t1 MTLTFLVTWLPYAIISLVFAFGFSFESPVVILPTMFAKSSCAYNPFIYCFTHEKFRDAVLKIFCNRKNKVHIGDERNESL PWRTEEREATVSYHRWVGARNMFTASSFQDGTDCSCSQKYILQEDIVRIHMEPRAPVMEAGQIMTEFSNF |
|