Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1167.1_24738
Locus scaffold1167.1 : 58711 ... 59685 : -
To GenomeBrowser scaffold1167.1:58711..59685
Genes list of scaffold scaffold1167.1
Synonym pfu_aug1.0_3587.1_08666

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1167.1_24738.t1 gi|676458596|ref|XP_009055027.1| hypothetical protein LOTGIDRAFT_118654 [Lottia gigantea] 1.99965e-42
pfu_aug2.0_1167.1_24738.t1 gi|524900422|ref|XP_005106631.1| PREDICTED: huntingtin-interacting protein K-like isoform X1 [Aplysia californica] 1.0e-37
pfu_aug2.0_1167.1_24738.t1 gi|188536012|ref|NP_001120942.1| huntingtin-interacting protein K [Danio rerio] 3.0e-35
pfu_aug2.0_1167.1_24738.t1 gi|91078414|ref|XP_974638.1| PREDICTED: huntingtin-interacting protein K [Tribolium castaneum] 4.0e-35
pfu_aug2.0_1167.1_24738.t1 gi|187608775|ref|NP_001120475.1| huntingtin-interacting protein K [Xenopus (Silurana) tropicalis] 5.0e-35

Transcript
Transcript IDpfu_aug2.0_1167.1_24738.t1
Definition-
>pfu_aug2.0_1167.1_24738.t1
atggcgaacatggaagacgaaacacaagttgaagccggcgaagaaacggcagaaacgaaggaaataaaatctaaaaagca
tgattcaggagcgagagatctggagaaagttacagactatgtggaagaaacagaaatatccgcccaaagcatcggtgacg
caatgaaagcaatgagtgacagaaaaacaaaagaacgagcactcaaacaggaaagagaacgggaacttgctaaagtgaaa
ataaacaaagatgacgttgatttgattgtgaaagaaatggaaattcaacgtcatatggcagaaagaacactaagagaaca
taaaggcgatgttgttgaggctttgattgcattgactaactag

Protein
Protein IDpfu_aug2.0_1167.1_24738.t1
Definition-
>pfu_aug2.0_1167.1_24738.t1
MANMEDETQVEAGEETAETKEIKSKKHDSGARDLEKVTDYVEETEISAQSIGDAMKAMSDRKTKERALKQERERELAKVK
INKDDVDLIVKEMEIQRHMAERTLREHKGDVVEALIALTN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495