Gene
| Gene Model ID | pfu_aug2.0_1168.1_28104 |
|---|---|
| Locus | scaffold1168.1 : 131108 ... 141805 : - |
| To GenomeBrowser | scaffold1168.1:131108..141805 |
| Genes list of scaffold | scaffold1168.1 |
| Synonym | pfu_aug1.0_2178.1_44264 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1168.1_28104.t1 | 3 | 1 | ADH_N | 28 | 139 | 0.0 | 175.0 | 3.7e-30 | 5.5e-27 | 93.6 |
| pfu_aug2.0_1168.1_28104.t1 | 3 | 2 | ADH_N | 178 | 287 | 0.0 | 175.0 | 2.1e-29 | 3.1e-26 | 91.2 |
| pfu_aug2.0_1168.1_28104.t1 | 1 | 1 | ADH_zinc_N | 327 | 456 | 1.1e-20 | 73.5 | 1.3e-23 | 1.9e-20 | 72.7 |
| pfu_aug2.0_1168.1_28104.t1 | 3 | 3 | ADH_N | 412 | 433 | 0.0 | 175.0 | 2.9 | 4200.0 | -2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1168.1_28104.t1 | gi|755954929|ref|XP_011302932.1| | PREDICTED: sorbitol dehydrogenase-like [Fopius arisanus] | 0.0 |
| pfu_aug2.0_1168.1_28104.t1 | gi|655862967|ref|XP_008267298.1| | PREDICTED: LOW QUALITY PROTEIN: sorbitol dehydrogenase [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_1168.1_28104.t1 | gi|736238677|ref|XP_010784317.1| | PREDICTED: sorbitol dehydrogenase [Notothenia coriiceps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1168.1_28104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1168.1_28104.t1 atggcgtccgagaaaatatgtgctgtcctcaggggacccaggaaaatagagttatcgaagaagaccgttgaagatcctgg ccctgatgatgtacttatatgcatgaagtcaatcggtatttgtggtacggacatatcattctgggaagacggtcattttc ttggcagaccactggacggctccatacctggacatgaatgtgctggcgtagtggccaaggtcggcagcaatgttatacat ctaaaggagggagataaagtgacagtcaatccagccatatcttgtggtaactgcagggaatgtcgatcaggaaatggtac catttgtgacaagatgaagggtatgggggtggtaccacacccttacggggggctgatgcagtctgccatacaccctgcac agttcgtttacaaattaccggacagtatgactatggatgaagccgctagcatagaaccactctgtgtagctcaccgtgca tgtgaaaaagctggtatatcacttggtagtaacgtactcatcacaggagcagatgtacttatatgcatgaagtcaatcgg tatttgtggtacggacatatcattctgggaagacggtcattttcttggcagaccactggacggctccatacctggacatg aatgtgctggcgtagtggccaaggtcggcagcaatgttatacatctaaaggagggagataaagtgacagtcaacccagcc atatcttgtggtaactgcagggaatgtcgatcaggaaatggtaccatttgtgacaagatgaagggtatgggggtggtacc acacccttacggggggctgatgcagtctgccatacaccctgcacagttcgtttacaaattaccggacagtatgacaatgg atgaagccgctagcatagaaccactctgtgtagctcaccgtgcatgtgagaaagctggtatatcacttggtagtaatgta ctcatcacaggagcaggtcccattgggatgtgttgtttactagtggccaaggccatgggagcagctaccataagtataac agacctagacgaaaagaggctatcaactgccaaggcagcgggagctaaatttacctttaccatgagtaagggggaggatc cgacggccgcagtaaggaggatcgtgaaggaggcaggaggggcaccaagctgtgtactggaaacaagtgggtctgaggca gctctcaatttgggtattatggcagttagaaaagctggagtggtggtgcaagttgggttgccacacggtgatataaaagt caacatgaccgttgttattttgaaggaaattcaattaaaagggacgctagggtatctggacagatttgaagaaatgatag agatggtatccaatggtagtattgacgtcaagccattaatatctcaccatttccctatgagcagagttcaggaagctttc gaagcagcatcaaggagagatggaatgaaaatcatcattaatgtggatgacctttcaaatttataa |
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Protein
| Protein ID | pfu_aug2.0_1168.1_28104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1168.1_28104.t1 MASEKICAVLRGPRKIELSKKTVEDPGPDDVLICMKSIGICGTDISFWEDGHFLGRPLDGSIPGHECAGVVAKVGSNVIH LKEGDKVTVNPAISCGNCRECRSGNGTICDKMKGMGVVPHPYGGLMQSAIHPAQFVYKLPDSMTMDEAASIEPLCVAHRA CEKAGISLGSNVLITGADVLICMKSIGICGTDISFWEDGHFLGRPLDGSIPGHECAGVVAKVGSNVIHLKEGDKVTVNPA ISCGNCRECRSGNGTICDKMKGMGVVPHPYGGLMQSAIHPAQFVYKLPDSMTMDEAASIEPLCVAHRACEKAGISLGSNV LITGAGPIGMCCLLVAKAMGAATISITDLDEKRLSTAKAAGAKFTFTMSKGEDPTAAVRRIVKEAGGAPSCVLETSGSEA ALNLGIMAVRKAGVVVQVGLPHGDIKVNMTVVILKEIQLKGTLGYLDRFEEMIEMVSNGSIDVKPLISHHFPMSRVQEAF EAASRRDGMKIIINVDDLSNL |
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