Gene
| Gene Model ID | pfu_aug2.0_1168.1_28106 |
|---|---|
| Locus | scaffold1168.1 : 175326 ... 185915 : + |
| To GenomeBrowser | scaffold1168.1:175326..185915 |
| Genes list of scaffold | scaffold1168.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1168.1_28106.t1 | 2 | 1 | Nrap | 171 | 484 | 0.0 | 261.8 | 0.0 | 0.0 | 254.0 |
| pfu_aug2.0_1168.1_28106.t1 | 2 | 2 | Nrap | 494 | 537 | 0.0 | 261.8 | 3.7e-05 | 0.27 | 8.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1168.1_28106.t1 | gi|291223469|ref|XP_002731732.1| | PREDICTED: nucleolar protein 6, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1168.1_28106.t1 | gi|733924549|ref|XP_010723506.1| | PREDICTED: nucleolar protein 6 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_1168.1_28106.t1 | gi|513228403|ref|XP_004937144.1| | PREDICTED: nucleolar protein 6 isoform X3 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1168.1_28106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1168.1_28106.t1 atggtcaagaaaaggaaatctcctattgtcaaaaaagccattattgatgaatctgaggaagaaaacattgacgaatctaa tgaagatgaagagtatgtagcagatgaagtagatgatttaagtgatgaagatggttctctagatgagtctgatgaagatg agagtcctcccaagaaaaagaagaaagtgacgagcagagataaaaacaaacctccgaccaatgaagagctgaatgaactc aaggaaacacagacactgtttcattccagcctcttcagactgcagatatctgaattactatcagaggtccagataaaggc taagaggagggcacaaatggatgaggccataaagaaactgacgtctcttattacaagcatacatgaaaagagtcagcctg agaaaacattgattcgaacaaatgtcgagattcctatgaacgatctagccagtaaagttaacagaacatctaaattcatt cctgctgaaaaagtgttcgtaatagggagctatcttactgagacgtgcgttaagccccatgtaaaagtagacttggctgt tgtcatgcccaaagtgatgatccatacaaaggattacttaaactttaggtacaacaagaagaaggcccagtatttaggtg tactagcggcatatctgagaagtaaacaatgtatcgagcacatcaagttctcataccaccaccacaacacactgaaacca atactctgtcttaaagttaaaggtgatgaaggaaaaccagtggcattcaatatccatgttgttttggagaaagatacatt taaactgaatcgtttccatccaaagaagaacaatgtacggaaacagtggtttaatggagagcagcaaatagaagaagatg gcttggtgtctgaccagccacccactccattctataatacatcaatccttagggatctaacaacacaaacaacatgctcc tgtctacagtctacatatagagacgccccaaacatcagggagggattttccatgctcagagtatggcttgatcaacgaca actctcaagtagttatggtggatttacgagttttcacatgtctatgtacctggtatatttgatgtcaaaacgcaaaatta acaagttcatgagtagttaccagattgtccgcaatactctggatcatttatctaagtctgattggtgtaaggaaggaatc acacttaataacactacatcagacccccaccaaccctgtatggaggattttcaccagcattttgatgttgtatttgttga cactactggatatcttaacctgagtgctgaaatgaattgttcaacatttcaaagagtaaagcatgaagctcagttagcca tacagagtctgacaacacccggcctggacagcttctcatcactattcatgacaaaagtagcttttgagaggaaatttgat catgtctttcagaagtctcctactgttatcgtaacagttgagatatctctgctttgcaacgtaaagcatgaagctcagtt agccatacaaagtctgacaacacctggcctggacagcttctcatcactattcatgacaaaagtagcttttgagaggaaat ttgatcatgtctttca |
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Protein
| Protein ID | pfu_aug2.0_1168.1_28106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1168.1_28106.t1 MVKKRKSPIVKKAIIDESEEENIDESNEDEEYVADEVDDLSDEDGSLDESDEDESPPKKKKKVTSRDKNKPPTNEELNEL KETQTLFHSSLFRLQISELLSEVQIKAKRRAQMDEAIKKLTSLITSIHEKSQPEKTLIRTNVEIPMNDLASKVNRTSKFI PAEKVFVIGSYLTETCVKPHVKVDLAVVMPKVMIHTKDYLNFRYNKKKAQYLGVLAAYLRSKQCIEHIKFSYHHHNTLKP ILCLKVKGDEGKPVAFNIHVVLEKDTFKLNRFHPKKNNVRKQWFNGEQQIEEDGLVSDQPPTPFYNTSILRDLTTQTTCS CLQSTYRDAPNIREGFSMLRVWLDQRQLSSSYGGFTSFHMSMYLVYLMSKRKINKFMSSYQIVRNTLDHLSKSDWCKEGI TLNNTTSDPHQPCMEDFHQHFDVVFVDTTGYLNLSAEMNCSTFQRVKHEAQLAIQSLTTPGLDSFSSLFMTKVAFERKFD HVFQKSPTVIVTVEISLLCNVKHEAQLAIQSLTTPGLDSFSSLFMTKVAFERKFDHVF |
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