Gene
| Gene Model ID | pfu_aug2.0_1174.1_14843 |
|---|---|
| Locus | scaffold1174.1 : 66627 ... 122315 : - |
| To GenomeBrowser | scaffold1174.1:66627..122315 |
| Genes list of scaffold | scaffold1174.1 |
| Synonym | pfu_aug1.0_5612.1_59825 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1174.1_14843.t1 | 1 | 1 | fn3 | 540 | 611 | 2.2e-10 | 40.5 | 6.3e-13 | 6.6e-10 | 38.9 |
| pfu_aug2.0_1174.1_14843.t1 | 2 | 1 | Septin | 621 | 671 | 1.6e-08 | 33.9 | 0.83 | 880.0 | -1.4 |
| pfu_aug2.0_1174.1_14843.t1 | 2 | 2 | Septin | 689 | 775 | 1.6e-08 | 33.9 | 6.0e-11 | 6.4e-08 | 31.9 |
Transcript
| Transcript ID | pfu_aug2.0_1174.1_14843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1174.1_14843.t1 atgcgcgactccaaatttcctggaagttttgataaagtagtatatccagatataataaaacgttcaaaatatcattggag ggaagataggaagagatgcaaaagggacaatatagaaacatcaaacgcaaaacactacacatacaatgtatacccagggg aaactggtgccgacttaggacggccaactgccacgccacaagcaaatgggaagacagagccccaaccacctgccctctct gactccacgggtgataacatgcgtgaactcgctacagccggcaaagcactaactgtatacgccttctgtttttatatcca tttacaaatccatctgtgtgtttcatgggcccctgcgtcatgctgtctttttgtatggtcatcttacagtgcggaggtta ttttacaacaaaattatgcgttcttcgacaccacgtgagcaaataagtccaaggaagaaatggacgatcaaagtcgagta aaagatcccgaagaagaaacggatggaagtaagaaggatgaatcaagtggagtaaaagattccgaggaagaaatggatgg atgtgacaaagatcaaagtcgagtaaaagataccgaggaggaaatggatggaagtaagaaaggtgaactatgtgaaccaa atggagcaaacgattccgagacagaaaaagatagaaataagaaggaagatacgagtcgagtaaaagatccccatgaagaa atggataaaaataaaaaagacgatccaagtcgagaacaaaattccgaggaagaaacggatggaagtaaaaaggacgaatc aagtcgagtaaaagattccgaggaagaaatggatggcagtaagagggacgatccaagtagacttaaacattctgaggaag aaatggatgatagtaagaaggacgaaccaagcggagaaaaagattctgagggagaattgggtggaagtacgaaggacgaa cccagtggaattaaacctgagtacaaaaagaagggaggagatctccaacaagaccccgttgcagcatcaacagtaaaaca ccaaaacacccgatgcaaaaacacaaaagacgagtacagcacgagacggaaaagagacacacgacatttaaacatcaaac acaaaagactacacataaaccgacgagaccaatgggtaaccggtgccgactttggacggccatctgtcaaagcattgttt gtagggggtatattacaggatttactgttatcctgtagagtaaaagattccgaggaagaaaataatagaagtaaaaggaa agaaacaagtcgagaaaaagatgccgaagaagaaatggatagaagcaggaatgaggaatcaagtggaggttccgaaaaga aagaaaaagatgtatcagagttgggagtcaaggagaagagtaagctgttcaatgctgctattgagaagaataaaaatgaa ggtagagttagcaccaattcaaggttctctaaggagaatatacacggagaaaaagatagatatactccaagttttcatca gagagctgctggacgtggacatggcataagccaaaaagatagagttcctaatcctgttgaagtagttaaatcttccacga gcaaacctgacattttcacagtaactcatgaatccgttgcattgctttgggaaaaaagtacagaaaaagttgactactac cggattaaatacaaagaagttattgcagatacttggaagactttaaatacaaaagatgcgaaaaataataatacaacagt gcacggattaaagagtagcaccaaatatctcttcaaagtgtgcgcagtgtgcaatgaggaggagggtccttacacagatg tcagtctgacggttgagacaaagccctcttttgctaatcagctgtgtgaaactttattacaacaagacagagaacaggca gcaaatttcaaagacggagaaaaaccagggaagatcaaaatacctataaccgagacagtaataagcaaacatgccaaaac aagaaaatgtgttgtgggtacacgtaaagggttatcaagggtcggggaaaaaagcccagtagagaaaactattatgttag ttggagcctcaggtgctggtaaaacaactcttttggatggaatgataaactatataactaatgtggcattcaacgatgag ttcaggtttactgtagttggtatggtgcacgatgaaaaacagaaaaagggaaatcaggctgtgtcgcaagctgaatggat aacgcaatacacgattcatccaatcatcggaggtagggtgaactttactctcaatataatagatacacctggatttggcg actaccggggcgtagaacgcgacaaattgttggtagaacaaatacgtgaattgttctgtacaaaggggaaaaacggagta gactcgatagatgctatttgctttgtcaccaaagcaccccttgattgcctgacacccattgaccgttatatctccgattc cattctgtctgtttttggtaaagatattgcgtcaaatattgttattatggtcacgtttgcagatgggggcacgcctccag ttttagcagcattaaagaacgggaatgttcctttcaaagaacattttttgttttacaatagcgcattattagcccaagag actgaggagtttggcccatccttttgggacttgagccaagaaaactttcgtaccttcttcactcatttgcttggaatgga gaaacgaagtcttactcttacggttgaagtattaaaagagagaaaacagttagaagaaactgcaaatggacttgttccac aggtcaacagggccctgaacaagatggaagaaataagacgacatagacaattactcgataaatacaaactggagatggac gccaacaaagatttcaaatataaggacaagagatcttatgataagaagattgatttagagccaggtgttcatgtaaccaa ctgtacattctgccatcaaacatgtcattttccatgtttcattcccaacaatgataaaaagaattgcgcagttatgggta gtgatggtcactgcacagtatgcaaaagtaaatgcttatggaatcttcatttcaacaatgactacaggatagaaatggta gaggaagaatttgaagggacaagcgaagatctgctgacgaggtacaacgtagctaaggatagcaaagacaagacagaaag ccttttgcacaacatgacagctgaaatgactacgatatgcgctgaagtacaaaggctgataacagagagtaacagatgtt taaatcgtctgaaagacatagccctgaaaccagatcctctgaatgatgtacagtatattgaacagctgatagagacagaa aggttgaataaagaagctggattccggggtaggataaagtcacttgaagacatcaagaagcaagcagaagtgacaacaac agttcaagaaggaactttcaaacctttttctgatatgacatga |
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Protein
| Protein ID | pfu_aug2.0_1174.1_14843.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1174.1_14843.t1 MRDSKFPGSFDKVVYPDIIKRSKYHWREDRKRCKRDNIETSNAKHYTYNVYPGETGADLGRPTATPQANGKTEPQPPALS DSTGDNMRELATAGKALTVYAFCFYIHLQIHLCVSWAPASCCLFVWSSYSAEVILQQNYAFFDTTXANKSKEEMDDQSRV KDPEEETDGSKKDESSGVKDSEEEMDGCDKDQSRVKDTEEEMDGSKKGELCEPNGANDSETEKDRNKKEDTSRVKDPHEE MDKNKKDDPSREQNSEEETDGSKKDESSRVKDSEEEMDGSKRDDPSRLKHSEEEMDDSKKDEPSGEKDSEGELGGSTKDE PSGIKPEYKKKGGDLQQDPVAASTVKHQNTRCKNTKDEYSTRRKRDTRHLNIKHKRLHINRRDQWVTGADFGRPSVKALF VGGILQDLLLSCRVKDSEEENNRSKRKETSREKDAEEEMDRSRNEESSGGSEKKEKDVSELGVKEKSKLFNAAIEKNKNE GRVSTNSRFSKENIHGEKDRYTPSFHQRAAGRGHGISQKDRVPNPVEVVKSSTSKPDIFTVTHESVALLWEKSTEKVDYY RIKYKEVIADTWKTLNTKDAKNNNTTVHGLKSSTKYLFKVCAVCNEEEGPYTDVSLTVETKPSFANQLCETLLQQDREQA ANFKDGEKPGKIKIPITETVISKHAKTRKCVVGTRKGLSRVGEKSPVEKTIMLVGASGAGKTTLLDGMINYITNVAFNDE FRFTVVGMVHDEKQKKGNQAVSQAEWITQYTIHPIIGGRVNFTLNIIDTPGFGDYRGVERDKLLVEQIRELFCTKGKNGV DSIDAICFVTKAPLDCLTPIDRYISDSILSVFGKDIASNIVIMVTFADGGTPPVLAALKNGNVPFKEHFLFYNSALLAQE TEEFGPSFWDLSQENFRTFFTHLLGMEKRSLTLTVEVLKERKQLEETANGLVPQVNRALNKMEEIRRHRQLLDKYKLEMD ANKDFKYKDKRSYDKKIDLEPGVHVTNCTFCHQTCHFPCFIPNNDKKNCAVMGSDGHCTVCKSKCLWNLHFNNDYRIEMV EEEFEGTSEDLLTRYNVAKDSKDKTESLLHNMTAEMTTICAEVQRLITESNRCLNRLKDIALKPDPLNDVQYIEQLIETE RLNKEAGFRGRIKSLEDIKKQAEVTTTVQEGTFKPFSDMT |
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