Gene
| Gene Model ID | pfu_aug2.0_1174.1_14844 |
|---|---|
| Locus | scaffold1174.1 : 130194 ... 138585 : - |
| To GenomeBrowser | scaffold1174.1:130194..138585 |
| Genes list of scaffold | scaffold1174.1 |
| Synonym | pfu_aug1.0_5612.1_59828 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1174.1_14844.t1 | 1 | 1 | fn3 | 53 | 130 | 1.5e-13 | 50.6 | 6.8e-16 | 3.9e-13 | 49.3 |
| pfu_aug2.0_1174.1_14844.t1 | 1 | 1 | Septin | 204 | 291 | 1.1e-09 | 37.7 | 4.3e-12 | 2.4e-09 | 36.6 |
| pfu_aug2.0_1174.1_14844.t1 | 2 | 1 | AIG1 | 205 | 362 | 2.6e-06 | 26.7 | 4.5e-09 | 2.6e-06 | 26.7 |
| pfu_aug2.0_1174.1_14844.t1 | 2 | 2 | AIG1 | 402 | 459 | 2.6e-06 | 26.7 | 4.7 | 2700.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1174.1_14844.t1 | gi|658900407|ref|XP_008433028.1| | PREDICTED: uncharacterized protein LOC103480060 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1174.1_14844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1174.1_14844.t1 atgctatatttcttttacttggaactctcagagcctatttataattttgatcacaggaagaaatcaaacagttatcagga gcttagaagtaatgaaaactacatataccgaagagataggtcttcacagcctgatataattaaatcctccgccaccaaac cagatattgtcaatgtaaccccagaatcagttttattgtcttggaaaaatcccaaaagaaccgaagaagtagactactac aaaattaaatacaaggaggtcaatgcaactaaatgggaggcctttactacaaaggacaaggcacgtactgcaacagtagt tggattgaaaagtagtaccaagtatcacttcaaagtgggtcctgtctacgatgatgaggaaggtccgttcacagatgtca gtgagacggttgagacaaagccctctttagccatgggggtgcttgattttgtgagacaacaagacagagggaagatccca gatcacgaagacgtagagaaaccagtcaagatcaaaatacctttaaccgagcaatcaatcaacaaacatgcaaaaacaag aaaatgccttgttgaattatcaaggggatggaaaagaggcccagttgagaaaaccattatgttagttggagcctcgggta ctggtaaaacaactcttttggatggaataatgaattatgtcgctaccgtgtcattgaacgatgactttagattcactgtg gctgatcatgcccatgaaaagcagaaacagaagaaccaggcggtatcgaaagctgaatggataacgcattacaagatccg tccaatcaacggtggaagagtaaactatactctcaatgtaatagatacacctggatttggcgattaccgtggcgtagaac gcgacaaatcgttggtagaacaaatacgtgaattgttcgctacaaagggggaaagcggagtagactcgatagatgctatt tgctttgtcaccaaggcaccacttgattgtctgactcccactgaccgttatatctccgattccattctgtctgtttttgg taaagatattgtgtcaaatattgttattatggtcacgtttgctgatggaaacatgcctccagtggtagcagcattaaagg cggaaaacgttcctttcaaagaacatttcttgtttaacaattctgcattattcgccaaagagactgaggagtcttcaaca ttcttttgggatatgaaccaaaagaactttcgtaccttctttgatcacttgctgggaatggagaaacgaagtcttactct tacagttgaagtattaagagagagaaaacagctggaacaaactgtgaatgggctccttccacaagtcaacaaaggcctaa acaaaatggaggaaattcgacgacatagaaagttactggatagatacgaaagggaaatgatggccaatgaaaacttcaaa tttaaggacaaaagaacttatgacaagagaattgatttagaggctggggtccatgtaaccaattgtatacactgtcatca aacatgccatttcccgtgcttcattccaaacaatgacaacaaggcgaattgtgcagctatggcatctgatggtcactgta cggtatgcaaacagaaatgtctctggaatctccatttgaataatggttacaggatagaaatgtacgaagaagaatatgaa gggacaagcgaggatctattgcagatgtacaacgtagcgaaggatagcaaagacaagacagaaagccttttacacaacat gaaggctgaaatggctacgatatgcacagaagtacacaggatgataacagagagtaacagatgtttaaatcgtctgaaag tcatagccctgaaaccagatcctctgaatgatgtaaagtatattgaacagctgatagagacagaaaggataaacggagaa gctggattccgtggtaggataaagtcacttgaagacatcaagaagcaagcagaagtgacaacaaaagttaacgaaggaac attcaaaccatttcctgactttgatatggaatga |
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Protein
| Protein ID | pfu_aug2.0_1174.1_14844.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1174.1_14844.t1 MLYFFYLELSEPIYNFDHRKKSNSYQELRSNENYIYRRDRSSQPDIIKSSATKPDIVNVTPESVLLSWKNPKRTEEVDYY KIKYKEVNATKWEAFTTKDKARTATVVGLKSSTKYHFKVGPVYDDEEGPFTDVSETVETKPSLAMGVLDFVRQQDRGKIP DHEDVEKPVKIKIPLTEQSINKHAKTRKCLVELSRGWKRGPVEKTIMLVGASGTGKTTLLDGIMNYVATVSLNDDFRFTV ADHAHEKQKQKNQAVSKAEWITHYKIRPINGGRVNYTLNVIDTPGFGDYRGVERDKSLVEQIRELFATKGESGVDSIDAI CFVTKAPLDCLTPTDRYISDSILSVFGKDIVSNIVIMVTFADGNMPPVVAALKAENVPFKEHFLFNNSALFAKETEESST FFWDMNQKNFRTFFDHLLGMEKRSLTLTVEVLRERKQLEQTVNGLLPQVNKGLNKMEEIRRHRKLLDRYEREMMANENFK FKDKRTYDKRIDLEAGVHVTNCIHCHQTCHFPCFIPNNDNKANCAAMASDGHCTVCKQKCLWNLHLNNGYRIEMYEEEYE GTSEDLLQMYNVAKDSKDKTESLLHNMKAEMATICTEVHRMITESNRCLNRLKVIALKPDPLNDVKYIEQLIETERINGE AGFRGRIKSLEDIKKQAEVTTKVNEGTFKPFPDFDME |
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