Gene
| Gene Model ID | pfu_aug2.0_1177.1_24751 |
|---|---|
| Locus | scaffold1177.1 : 128526 ... 145820 : + |
| To GenomeBrowser | scaffold1177.1:128526..145820 |
| Genes list of scaffold | scaffold1177.1 |
| Synonym | pfu_aug1.0_1810.1_66105 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1177.1_24751.t1 | 2 | 1 | HTH_psq | 184 | 219 | 8.2e-25 | 86.0 | 1.1e-14 | 5.5e-11 | 41.8 |
| pfu_aug2.0_1177.1_24751.t1 | 2 | 2 | HTH_psq | 512 | 548 | 8.2e-25 | 86.0 | 1.5e-14 | 7.2e-11 | 41.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1177.1_24751.t1 | gi|676450275|ref|XP_009052326.1| | hypothetical protein LOTGIDRAFT_159569 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1177.1_24751.t1 | gi|242002328|ref|XP_002435807.1| | hypothetical protein IscW_ISCW019047 [Ixodes scapularis] | 3.0e-24 |
| pfu_aug2.0_1177.1_24751.t1 | gi|383858537|ref|XP_003704757.1| | 4.0e-24 | |
| pfu_aug2.0_1177.1_24751.t1 | gi|662212082|ref|XP_008479753.1| | PREDICTED: LOW QUALITY PROTEIN: mushroom body large-type Kenyon cell-specific protein 1 [Diaphorina citri] | 4.0e-24 |
| pfu_aug2.0_1177.1_24751.t1 | gi|157106551|ref|XP_001649373.1| | AAEL004572-PA [Aedes aegypti] | 6.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1177.1_24751.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1177.1_24751.t1 atggttgattgtggaaattctaggtgttctcaagaaagacgctcatttcgaaaagaattattgacatggagcaagaaaat accgatcgccttaggtttagagagaattgctgtggagctggcaggggaagaatcaatgaagcgacttctatatccattta attgcttggaaactaaagaggtaaaagattggaagcaggaacagaattgtttcttttgtgagtcaagattgcagcttatg tttgaggctgtgtcacagttgatggaagaagccaagagtggaaaaagtgttcaagacaatccaagtctgcgatatctgca agaattactgccctactgtccccagttttacacagagaatgtagggaaggagctattagcagaattaaagtccacggcag gcccatctatcaccatagaaacaacagtagacagtgatgcagggtctccacaaagtcaacgggagcccattcatctcaaa gtacctcatataattgctcagacatgtaagaagaaggagacttttcccaccagttgtaagaagtcctatacagaggaaga actacaggcagctgtaagtgagatccagagcggaaaactgggtaccagacgtgcttcagtgctgtatggaatccctcgtt caaccctccgtaacaaaatattcaaaatgggatcagataaaccagagtcaatatatcagagcttgaatggaggtgataga atagatgatcctatggaaatcgctatgaaatggtcagagcttctacaggggtcaaaccttgcgcttctgtctttgccaca gttgccttttggtttccatggagactattcatttccaaggggaatgttcatgcatggagatgagagcgaagaaagaaaat tagagtatcttcgtagaaagcataatctaggaagaaagagggaaccatatcaaactcaatattcacatgaattaaaattg ccagttcttcaagatattatccagaagctagtggaggagaggatggaaatggagagaaatacaagtagcttaagacatat taagaaagaagataaagagaaaaagagctcgatactgtccggaaatggtgctacagttctgtctgcccataacataggaa actatgcgttggcctcagatttggcttcagacatcgtaattccgtcctttagacctattcagaatgatgagaaaagtaat gagtcacctcaggaatatatctatcatagttctttagataagttagaaaattctcgcataggtgaggcactcaaagacat aatagtcaaaacaatttctgagaaggtgcgcttcaaatctcaggccttggctgactattgccagaattcattaagcagca gtcacttgacagagtcagacacaaatagtaaggattcttcctcttcccattcgaacactccatctcctgtgaagaggatg agaattgaggattctcccaagaaaaagggagatcaacctgtcaaaaagacccgtccaaagcgtggccaatatagacgcta caacagccagctattgatggaagctgttaaggcagtgcagcgtggagaaatgagcgtccatagagcaggtagttactatg gagttcctcactcgactctggaatacaaggtcaaggaacgtcatctactgcgtcagaagaaaatcaaagagcaaagagaa caaaaagaggcggagcaagctgccatggctgcatctagcagtaacagtagcggtagcagcactgcagggggtagtagtgg agggaagaaaaatacaaaggatcaaagttctacaagcaaaggcagttctggaaaatcagatcagaaggagaacaccttga agaaacagaaccctgctcagaactggatggcaccttttttacccggaaattcaaattttgacttaggtctgtatagctcc tccgggtttgccttgaatactcctgcctctgaacttctcagaaaattacagcacaaagtacagagtaaagaagacgactt tgaccaagagaacagttacagccaactggtcaaatcaggaaaagtaagtgcactaggggacggcttcatgtttctgaatt aa |
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Protein
| Protein ID | pfu_aug2.0_1177.1_24751.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1177.1_24751.t1 MVDCGNSRCSQERRSFRKELLTWSKKIPIALGLERIAVELAGEESMKRLLYPFNCLETKEVKDWKQEQNCFFCESRLQLM FEAVSQLMEEAKSGKSVQDNPSLRYLQELLPYCPQFYTENVGKELLAELKSTAGPSITIETTVDSDAGSPQSQREPIHLK VPHIIAQTCKKKETFPTSCKKSYTEEELQAAVSEIQSGKLGTRRASVLYGIPRSTLRNKIFKMGSDKPESIYQSLNGGDR IDDPMEIAMKWSELLQGSNLALLSLPQLPFGFHGDYSFPRGMFMHGDESEERKLEYLRRKHNLGRKREPYQTQYSHELKL PVLQDIIQKLVEERMEMERNTSSLRHIKKEDKEKKSSILSGNGATVLSAHNIGNYALASDLASDIVIPSFRPIQNDEKSN ESPQEYIYHSSLDKLENSRIGEALKDIIVKTISEKVRFKSQALADYCQNSLSSSHLTESDTNSKDSSSSHSNTPSPVKRM RIEDSPKKKGDQPVKKTRPKRGQYRRYNSQLLMEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLLRQKKIKEQRE QKEAEQAAMAASSSNSSGSSTAGGSSGGKKNTKDQSSTSKGSSGKSDQKENTLKKQNPAQNWMAPFLPGNSNFDLGLYSS SGFALNTPASELLRKLQHKVQSKEDDFDQENSYSQLVKSGKVSALGDGFMFLN |
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