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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_11777.1_26416
Locus scaffold11777.1 : 256 ... 1585 : +
To GenomeBrowser scaffold11777.1:256..1585
Genes list of scaffold scaffold11777.1
Synonym pfu_aug1.0_2402.1_66311

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_11777.1_26416.t1 1 1 7tm_1 8 369 2.7e-22 79.1 7.0e-26 3.5e-22 78.7

Transcript
Transcript IDpfu_aug2.0_11777.1_26416.t1
Definition-
>pfu_aug2.0_11777.1_26416.t1
atgaaacgaggtagacgtgatagatatttcatacccgtcttagctgtggccgatataactgcttgtgtggtcatatgtgt
gtattcaatttttgaaaatacatattcattagcatttccgtcggaccttttgtgccgtgcatcatggttcatgatgtggt
ttatgacgtcaatttccgccttcgttttgagtgtgatagcgttcagtcgatacctgaagatttgtagaccccatggacca
caaatgacgatcatgagtaaaagaatagctcttttagggatattcgctgcttcaatagctctgtctgggcctcaggcacg
atacacaggtagtttcattttcaacgacacccttgacaacgacactttttccgtggttacttgtgctccaggagatccgg
agcagaccgttcaaagtaccgtctacttttctttcgttttcatcatctatatcgtaaatgcagtgtttacgtcatttctt
tacgtagctgttggacgaattatctatacaacgtttcaaagcgcaaagatcaaaaggagatcggacgtcgtgagtcatat
gccaactgtgacgagcgattctcacgaagactatgagcaaagtacagtggacagaaagagacgacgaccaacgatcggaa
gtcctatttttgaacatgtaaagcgtaaacgtaaacctgagacaactccctcagatgatggtttacttcacgtccctaca
ttaaacgaacctccgtcaagtgacatgtcagaatgtgtttctgaagcgaccgagaacaaaagaggtgacaatgctaggag
tagtatgtccagaaacgcgagtattgaaactttggatacattttcaattgaagaaagagtaccaaccataaatcgaattc
gcagaaaacatgtaaaaaggcgtgttcgagtgaactttaacctcatgtttttaacaattttcatcctttacgtcttgtca
tatactccgtcattgatatttctgtttataaatgaaagcaacctaaaactgtggttcgacttcagggatgacgaggtatt
gcttaatgtatgcttaacattacaaagaatgcttgtaattaaccatatagttaatccatttatttatgcatattttgacc
taacattcagagataaaataaagcgaaccgttcttcgacgtaagaaataa

Protein
Protein IDpfu_aug2.0_11777.1_26416.t1
Definition-
>pfu_aug2.0_11777.1_26416.t1
MKRGRRDRYFIPVLAVADITACVVICVYSIFENTYSLAFPSDLLCRASWFMMWFMTSISAFVLSVIAFSRYLKICRPHGP
QMTIMSKRIALLGIFAASIALSGPQARYTGSFIFNDTLDNDTFSVVTCAPGDPEQTVQSTVYFSFVFIIYIVNAVFTSFL
YVAVGRIIYTTFQSAKIKRRSDVVSHMPTVTSDSHEDYEQSTVDRKRRRPTIGSPIFEHVKRKRKPETTPSDDGLLHVPT
LNEPPSSDMSECVSEATENKRGDNARSSMSRNASIETLDTFSIEERVPTINRIRRKHVKRRVRVNFNLMFLTIFILYVLS
YTPSLIFLFINESNLKLWFDFRDDEVLLNVCLTLQRMLVINHIVNPFIYAYFDLTFRDKIKRTVLRRKK

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