Gene
| Gene Model ID | pfu_aug2.0_1185.1_18162 |
|---|---|
| Locus | scaffold1185.1 : 124096 ... 147688 : + |
| To GenomeBrowser | scaffold1185.1:124096..147688 |
| Genes list of scaffold | scaffold1185.1 |
| Synonym | pfu_aug1.0_7724.1_02486 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leucine-rich repeat-containing protein | GO:0005488 GO:0009987 GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1185.1_18162.t1 | 2 | 1 | LRR_8 | 82 | 125 | 6.2e-07 | 29.0 | 9.4e-07 | 0.0012 | 18.5 |
| pfu_aug2.0_1185.1_18162.t1 | 2 | 1 | LRR_4 | 82 | 104 | 1.4e-06 | 27.7 | 0.00051 | 0.63 | 9.7 |
| pfu_aug2.0_1185.1_18162.t1 | 2 | 2 | LRR_8 | 90 | 147 | 6.2e-07 | 29.0 | 8.6e-07 | 0.0011 | 18.7 |
| pfu_aug2.0_1185.1_18162.t1 | 2 | 2 | LRR_4 | 114 | 148 | 1.4e-06 | 27.7 | 1.6e-05 | 0.02 | 14.5 |
| pfu_aug2.0_1185.1_18162.t1 | 1 | 1 | Miro | 183 | 301 | 4.1e-12 | 46.6 | 8.5e-15 | 1.1e-11 | 45.3 |
| pfu_aug2.0_1185.1_18162.t1 | 1 | 1 | Ras | 183 | 316 | 6.5e-10 | 38.6 | 1.1e-12 | 1.3e-09 | 37.6 |
| pfu_aug2.0_1185.1_18162.t1 | 3 | 1 | TIR_2 | 763 | 801 | 1.1e-11 | 44.7 | 0.12 | 140.0 | 2.6 |
| pfu_aug2.0_1185.1_18162.t1 | 3 | 2 | TIR_2 | 857 | 867 | 1.1e-11 | 44.7 | 2.2 | 2700.0 | -1.5 |
| pfu_aug2.0_1185.1_18162.t1 | 3 | 3 | TIR_2 | 888 | 963 | 1.1e-11 | 44.7 | 1.1e-12 | 1.4e-09 | 38.0 |
Transcript
| Transcript ID | pfu_aug2.0_1185.1_18162.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1185.1_18162.t1 atgcctttgataacatttgacggagtgaaggagtcaatgaccaaggatcaataccaaagctggcataaagaaaatccctc tatatcaatgtacctctctgacaaggaggtgatgaacctgtacaatgagtatgactccaatgctaacgccatgctggaac tcaaggaactggctcagcttaacctcaaactcttctttgacattccaagacttggtttccaagagtcagatgagtatggc ggtgtaccgcctgtaatatttgagctgacgagtctacaggagttatacctatcataccaaggtatcacaatgatcacgaa acacgctactagcctggtcaatctacaggtcctggacgttagccactgtcctctactagagggtatagctggtccaatag gactgcttcctaatataaggagtataaacttacacagttgcccatctttgagaaccccaccaaatgaagtcgtcagtcgt ggatttgagtctgtcagggcttatctgaaacgtctcgctggaggattcactgaatgtcgtagaacaaaactaatgtttgt cggcttaggagaagctggaaaaactagcttactgcaagctcttatgagtggctccaagaagacgactggtacccagaatg ctcagctaacagacggtatcgagattaagacatggactataaaagacgacaaaggaaatgatatcatcttcagtgcctgg gactttgctggacagactgtgtattacaacactcaccagtttttcctgtctaaccgtgctgtgtacatgttactttggaa catgaggatgggcttcgagcacgcaggtctggatttctggctgagttctatcgcttgtcacgctccagaaactccaatca ttattattggtacccagtctgatcaggtaccaaagcctgagatacctgaaaaagatctcagaaggagatatcctcagatc tcggctttccattatgtcagctctatcaccggagatgtaagtatagagatctcacaaatatctcacatatatctctcaaa gtttgagataccagagaaagatctcagagggagatatcctcagatcttcgctctccattatgtcagctctatcaccggag atggtatacctgaccttgagaagacacttttagatgtcaccttgaagcagaaatatatgggagagaaagtaccccaagtc tggcttaacttggaaaagaaaatacttgctgagcggacaaagcagagcattttggattggtctatggttagagactttgc tatagagcaaggaatctacgatgataacgatgttaaacaggccattaagtttctggatgatctgggtacagtacaatact ttgacaatgatttcctcagggagaaggtggtcatcaacccacagtggattgttaacgtcatggcttgtgtagtctctgtc aagaaatcacctatacaggagaatgatgggagattttaccataaccacatcaaggatatatggggaaagtatgacatatc cttacacaattggctgctgagccttacagaggagtttgacttgaccttcccattgcctggaaatccaataaatgtggtgc catgcctactgccaatggaaccacctgctgagttaaaatggccagacttggacacagagagtggacatagagagaataag atgctgtacaaatttgcctacctcccggcaggtcttttcaacagagctcaggtgcgattgttccaattttctgatggcaa gatgatatggaagaaaggttctctactgaataagaatcatcacttggctctcatcaaacaagaaaatgacaaagagctga taatccaggttcaggggccccgacccgagaacatcctactactgatccatgaggtgtttgagagtttgatagaggagtcc ttccatggtgtggactatagcttctatgtaccatgtcctgactgtattacaaaagagggtaccaaggagccggccttgtt tcaggctgatctgattagacgagccaaagatctgaaggctccattcctacaatgtaacaagtacttccatgctgtgtcca tgggacaacttcttgagatgatgccagaggacaaggacagtgattttgacgttcacctccagcacagtatcagtgctcta cagtcgataaccaactcgatggcgtgtgacgtagccctactatactgtcaacaggacgtaccaccagagggagataactc agaaataagcccactgcagatcaaaaaggacatagagtcatgggggtactctatagcagtagcctgtgtgtccgacagct ttgagagagacccgcagtgtaacaccatgtttatatacgcaaaggaacagctgatgaaatctatcgttatttgtgttatc agggagagtatgatgtggcagaacactgacctcggcatgaaaataggtcaaccgaaaatgtcaatgttgaagacagtgaa gaggtatgacctgaagttacccgaccttaaaggtattgtggaggaatacatcgctggtactgtcaagggtaactcagagc accctgatgtatttataagctactgttgggcaaactcaaaggatgcctgttcccaggggacgcaatctaagcccggctct ctgggctttggtgacccaagagagatcaagagctttttagaaaaccatggtatcaagtgctggctagacattgaacaaat gggaaaggttggactctatcatgctatagcagtaggactacagaactgtaaactgattgtggcttgtgtatcagatgagt atgtggagtctgaagcttgtatgatggagctacggtttgcggtgtgtaacatggggctccccctggtggtagtcgtagtc ggcacaggaaagaaatggaagagaggcgagcttccattgttgatggggcgttccaaagacagtgccaggaagatctacat gcaagacgaggatccagaggcatttaatactctgttggaatctataaagaacatgttacctaaggaaggggcagcaagca aggcagagaaaaaacgcaaaaagatgatggaatggcagaaacaacaagagtcatccagaaaactggctgccggcaacaag caatcattccaggaggagtatgaattgatacagagaaagttcatccgccatatcataaacattacgcagtcattggatct ccaaactctacccaggcttatagtcttcgattttgtcaaaagtttatctgcaaaacgagaacaagcaccagatgctcgac cagagacacgtactggaagtcgtgatgacggggatagacccccaacatccaaacctaaaccagtctcacggaaaagtaac ctttcatctgaaagggtcaaggcggttttaggggaggatgatgctgatgtagaggattggcaagccgaggagttctgtat aaaagtgctttgtgaacatgaggagggttggcatttggtggagaaatcccttagcctagttacatatacctctgacgaag tgttccagattattaaggatgctgctccgtacctggccagaatttacactatcctcagacagagctcagtcaaactcaac cttctgtccagtaaagttggtgaaagcttcataaaatgccatctaccaagtgggaagatttcttggctatgtcccgagca ttcctctggtaaccgtatcaccaaactagccattggttctagcagcacccatggtgttggtaaaagtatgctgaaccgtg aagacgaactgttaaaagagttcatgccagagcatccaggatacctcagatggaaagccacaaacaagggaccagaacct gtcactgatacaggatttgacactgtggcaagaacaagtagaacgttacaacgtcattattccaaatctgggcgtcagaa aagtcaggcttgtgtgcttcagtaa |
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Protein
| Protein ID | pfu_aug2.0_1185.1_18162.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1185.1_18162.t1 MPLITFDGVKESMTKDQYQSWHKENPSISMYLSDKEVMNLYNEYDSNANAMLELKELAQLNLKLFFDIPRLGFQESDEYG GVPPVIFELTSLQELYLSYQGITMITKHATSLVNLQVLDVSHCPLLEGIAGPIGLLPNIRSINLHSCPSLRTPPNEVVSR GFESVRAYLKRLAGGFTECRRTKLMFVGLGEAGKTSLLQALMSGSKKTTGTQNAQLTDGIEIKTWTIKDDKGNDIIFSAW DFAGQTVYYNTHQFFLSNRAVYMLLWNMRMGFEHAGLDFWLSSIACHAPETPIIIIGTQSDQVPKPEIPEKDLRRRYPQI SAFHYVSSITGDVSIEISQISHIYLSKFEIPEKDLRGRYPQIFALHYVSSITGDGIPDLEKTLLDVTLKQKYMGEKVPQV WLNLEKKILAERTKQSILDWSMVRDFAIEQGIYDDNDVKQAIKFLDDLGTVQYFDNDFLREKVVINPQWIVNVMACVVSV KKSPIQENDGRFYHNHIKDIWGKYDISLHNWLLSLTEEFDLTFPLPGNPINVVPCLLPMEPPAELKWPDLDTESGHRENK MLYKFAYLPAGLFNRAQVRLFQFSDGKMIWKKGSLLNKNHHLALIKQENDKELIIQVQGPRPENILLLIHEVFESLIEES FHGVDYSFYVPCPDCITKEGTKEPALFQADLIRRAKDLKAPFLQCNKYFHAVSMGQLLEMMPEDKDSDFDVHLQHSISAL QSITNSMACDVALLYCQQDVPPEGDNSEISPLQIKKDIESWGYSIAVACVSDSFERDPQCNTMFIYAKEQLMKSIVICVI RESMMWQNTDLGMKIGQPKMSMLKTVKRYDLKLPDLKGIVEEYIAGTVKGNSEHPDVFISYCWANSKDACSQGTQSKPGS LGFGDPREIKSFLENHGIKCWLDIEQMGKVGLYHAIAVGLQNCKLIVACVSDEYVESEACMMELRFAVCNMGLPLVVVVV GTGKKWKRGELPLLMGRSKDSARKIYMQDEDPEAFNTLLESIKNMLPKEGAASKAEKKRKKMMEWQKQQESSRKLAAGNK QSFQEEYELIQRKFIRHIINITQSLDLQTLPRLIVFDFVKSLSAKREQAPDARPETRTGSRDDGDRPPTSKPKPVSRKSN LSSERVKAVLGEDDADVEDWQAEEFCIKVLCEHEEGWHLVEKSLSLVTYTSDEVFQIIKDAAPYLARIYTILRQSSVKLN LLSSKVGESFIKCHLPSGKISWLCPEHSSGNRITKLAIGSSSTHGVGKSMLNREDELLKEFMPEHPGYLRWKATNKGPEP VTDTGFDTVARTSRTLQRHYSKSGRQKSQACVLQ |
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