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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1189.1_31498
Locus scaffold1189.1 : 45011 ... 52975 : -
To GenomeBrowser scaffold1189.1:45011..52975
Genes list of scaffold scaffold1189.1
Synonym pfu_aug1.0_8758.1_53227

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1189.1_31498.t1 gi|524896689|ref|XP_005104816.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-like [Aplysia californica] 0.0
pfu_aug2.0_1189.1_31498.t1 gi|676451900|ref|XP_009052857.1| hypothetical protein LOTGIDRAFT_115810 [Lottia gigantea] 0.0
pfu_aug2.0_1189.1_31498.t1 gi|675873394|ref|XP_009022257.1| hypothetical protein HELRODRAFT_84162 [Helobdella robusta] 0.0
pfu_aug2.0_1189.1_31498.t1 gi|157107772|ref|XP_001649930.1| AAEL014889-PA [Aedes aegypti] 2.00386e-43
pfu_aug2.0_1189.1_31498.t1 gi|193671619|ref|XP_001942986.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 [Acyrthosiphon pisum] 1.99965e-42

Transcript
Transcript IDpfu_aug2.0_1189.1_31498.t1
Definition-
>pfu_aug2.0_1189.1_31498.t1
atgacaaacgaggagtatatgccaagttatgaggagctaactgttccagaattaaaacttacgtcacctgagctaagagc
tggagccttgtacttcggaaaattttgcgatgatacttgcaaggaattcatgctctgtaggagcgagactggcgatcgga
ggaaatgcataaatgaaggaaaggaagtcactcgatgtgcgttccagttctttgggaaagtgaagaagcactgtttacca
gaattcacacagtattacaaatgcattgatcgagtctggttcaacgagcttggatatgcacagtgccgagaccttcagca
tccgtttgatgaatgtgtaaaggaaaagattggagtagagaggccatacgttggttacttctccaagcgtcgtttataca
cgaacgacagaccggaaccacctccagaggaaataatgatcaaacggtccacaactatgccacccaccaaggaggaactg
aatgaacgtaagctacaatccatcgttaggccacgaggtcatttgttttcacagtcttttggcactagggtattcaggga
ggaaagtggagaacccataccgcacgaaaaagaggaatcttaa

Protein
Protein IDpfu_aug2.0_1189.1_31498.t1
Definition-
>pfu_aug2.0_1189.1_31498.t1
MTNEEYMPSYEELTVPELKLTSPELRAGALYFGKFCDDTCKEFMLCRSETGDRRKCINEGKEVTRCAFQFFGKVKKHCLP
EFTQYYKCIDRVWFNELGYAQCRDLQHPFDECVKEKIGVERPYVGYFSKRRLYTNDRPEPPPEEIMIKRSTTMPPTKEEL
NERKLQSIVRPRGHLFSQSFGTRVFREESGEPIPHEKEES

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