Gene
| Gene Model ID | pfu_aug2.0_1189.1_31501 |
|---|---|
| Locus | scaffold1189.1 : 66817 ... 88975 : - |
| To GenomeBrowser | scaffold1189.1:66817..88975 |
| Genes list of scaffold | scaffold1189.1 |
| Synonym | pfu_aug1.0_8758.1_53226 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1189.1_31501.t1 | 3 | 1 | Lectin_C | 67 | 173 | 1.1e-07 | 32.3 | 9.5e-09 | 2.8e-05 | 24.6 |
| pfu_aug2.0_1189.1_31501.t1 | 3 | 2 | Lectin_C | 208 | 297 | 1.1e-07 | 32.3 | 0.0025 | 7.5 | 7.2 |
| pfu_aug2.0_1189.1_31501.t1 | 1 | 1 | GPS | 685 | 730 | 2.0e-13 | 50.2 | 1.8e-16 | 5.3e-13 | 48.8 |
| pfu_aug2.0_1189.1_31501.t1 | 3 | 3 | Lectin_C | 696 | 707 | 1.1e-07 | 32.3 | 5.0 | 15000.0 | -3.5 |
| pfu_aug2.0_1189.1_31501.t1 | 1 | 1 | 7tm_2 | 747 | 983 | 1.3999e-42 | 145.4 | 1.4013e-45 | 2.20004e-42 | 144.8 |
Transcript
| Transcript ID | pfu_aug2.0_1189.1_31501.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31501.t1 atgcagttcatcacagataatgtcagaaaaaagatgatggtgcggacttttacgtacatcgtaatcctgttgaacttgag aggtacgatagtaagcggccagcagtcattcatctgcaaggacggatgggagttgatcaccacttcccctcagaatgggg aaacatcccgctcgtgtctcaagttctttgaaacccccgaaccatggggcgtggcgtcgtccgagtgcttaagctataac agtcaacttctaaggtttgatctaaaaatcaacaccttgaggggagaaacattccgtttatccaatcaatcatactggac agcattgcgtgcatatgaaggaggactattttgggacggagtaccgcctgttcatccgcaaggaaatcccttcaacacaa atgcgaatgcgttggtgacgactaacaacacaggagaatgtgtcttggccagggatttttccgatgccagggatctccag tttacagaatgtaccgacaaactaccctactactgctaccaatacactataacactcaacttgaataaagatacccagct ctgtaggaaaggtttctatggagatgtcaatctggaccattgttatgcattctactccactccacaaacttactatgaag cccaaagctcgtgtgagcagctaggaggacagttagctcaattacaattggctgatgcggaaagctttagatctctcagc caatgggattctagtatagcacaagtggtcttcaataccattgcgaacaggacgcgtggctggtttgatagaataaacag acaagacataacagagtgtaatgtgatgatacagagtgaagtgttggtggggctcgccattgactgcagtcaaaaatacc cctactactgtcaaatcagcaggactgaggcaggtggggaaggaagcggaagtctgagagtaatcaagggaaacataacg tgccagctatcccggagtctcaaccaatacgaagcaataaaaatgtacaaagacggaaaagaaatttctacacaaaatta cagattttcacccaatatgacggatatttccctcgatattatgacaacccaagaacctgtatcagacagaatggcatact ggtcaggggcgtaccaagatatcggattttaccggtgttcagtgtttcagagattaactggagcggtttcatcggtatcc ctttatgccgatatcgatgaggtgaaactgaaaaagagatttcacatagatggcgctaatacgatatacacaaactttgg gatccagccgtttgaaagcctggctataacgaatgagttccaaggatggatgagtagagctattaaacgtatgtcatcgg gaataggagagctgatgggaggattcaactttaaaacaaatatgtataaaatatcagacaacgggaaaatcatcatgttc aagataaccatcataccattccgtaccacgtggcccaacgttgacaatatcgccttattacaaaacgacataacgttagc actagaggacacaatggaggtgatacctgggaggaaaaaacgtcagactaccggtgtcagcaccactactcccttcactg ctgggagtgtatacgttatcaatactgaagtgtgttcgtcctcctatgtgaagaggttagacagggtattacaatttatt cccgtaagaattggagagaagaccgtatcagtggaaatatgtataacaggtttgaagttgaatcaggaggacaacaatgt caccgtactgaccaacgagtctttacaggttgtatggccaaacgctactatcacaccggacaccatagatactgccatcg tagtacctgagccactcgtcaaacgagggagtgttagattggtacttcagatatatgccaacactgatttgtttataacc cgtttgggggatagacgctatatgtctaacggtaaaatagcagcggctacgctcctgatagacaacgttaccgtcacaaa cctgggtgactacactgtcaaaacttacttcaaaccttacatggcaaccaaagagccggtatgcgggttctggaactaca gcatcaatgataattccggaggttggtccacagaggggtgtgtccttgtagacctacaggatgggcggtatatttgtgag tgtaatcacctcaccaacttcgccattttaattgatgctggtggtcaacaagaccctatagacgagggtaacaagcttgc cctgtctatcatcactattataggtttatcactgtccatcaccggacttacccttactgtggtatcatttatactcttca aacagatgcggcaggggcgtggtcagaagaccttatttaacctggccctggccctgctggcttctatcatagtgttcctg gccgggatagagcggacagagaactatacagggtgtatcgtggtggctgcccttctacactactttattctggtgtcgtt tgcctggatgctggtggagggagtgcttcagtacctcagatttgtgaaagttcttgggacatatatacccaacttcatgt taaaggcgggggtgccagcctggggagtaccactgattcccgtaattatcgtattggccgtggattacgacatgtacagc ggtggagacctatattgctggatgtcaaccactcctttatattttgctttcctcctccccgtgggtttgatcatcatcat caactttatcgtcttcttcatggtccttaataacatcttacgtcgtcccaaaggactgcagtccaaccaatcagatcgca agaaagctatgatcaatctcagggcatcagtatcagttgtcgttatactgggtctgacgtggatatttgggttcctgtcc atatatgacgcacgcctacctttccagtacatattcacaatactcaacgttttccaagggttcttcatcttcattctctt cgtagcgcgggaaaaagcgttcagagacggcttcaagaaggtgtgctgcagcaagccaaagggggacaaatacgtggctg ccagcacaaacgactcttacagtcataccaaatcgtcagacactaaacaaactacttttactaatcttggtgttacagac tctgatgtcaagaaacgggacggattctga |
|
Protein
| Protein ID | pfu_aug2.0_1189.1_31501.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31501.t1 MQFITDNVRKKMMVRTFTYIVILLNLRGTIVSGQQSFICKDGWELITTSPQNGETSRSCLKFFETPEPWGVASSECLSYN SQLLRFDLKINTLRGETFRLSNQSYWTALRAYEGGLFWDGVPPVHPQGNPFNTNANALVTTNNTGECVLARDFSDARDLQ FTECTDKLPYYCYQYTITLNLNKDTQLCRKGFYGDVNLDHCYAFYSTPQTYYEAQSSCEQLGGQLAQLQLADAESFRSLS QWDSSIAQVVFNTIANRTRGWFDRINRQDITECNVMIQSEVLVGLAIDCSQKYPYYCQISRTEAGGEGSGSLRVIKGNIT CQLSRSLNQYEAIKMYKDGKEISTQNYRFSPNMTDISLDIMTTQEPVSDRMAYWSGAYQDIGFYRCSVFQRLTGAVSSVS LYADIDEVKLKKRFHIDGANTIYTNFGIQPFESLAITNEFQGWMSRAIKRMSSGIGELMGGFNFKTNMYKISDNGKIIMF KITIIPFRTTWPNVDNIALLQNDITLALEDTMEVIPGRKKRQTTGVSTTTPFTAGSVYVINTEVCSSSYVKRLDRVLQFI PVRIGEKTVSVEICITGLKLNQEDNNVTVLTNESLQVVWPNATITPDTIDTAIVVPEPLVKRGSVRLVLQIYANTDLFIT RLGDRRYMSNGKIAAATLLIDNVTVTNLGDYTVKTYFKPYMATKEPVCGFWNYSINDNSGGWSTEGCVLVDLQDGRYICE CNHLTNFAILIDAGGQQDPIDEGNKLALSIITIIGLSLSITGLTLTVVSFILFKQMRQGRGQKTLFNLALALLASIIVFL AGIERTENYTGCIVVAALLHYFILVSFAWMLVEGVLQYLRFVKVLGTYIPNFMLKAGVPAWGVPLIPVIIVLAVDYDMYS GGDLYCWMSTTPLYFAFLLPVGLIIIINFIVFFMVLNNILRRPKGLQSNQSDRKKAMINLRASVSVVVILGLTWIFGFLS IYDARLPFQYIFTILNVFQGFFIFILFVAREKAFRDGFKKVCCSKPKGDKYVAASTNDSYSHTKSSDTKQTTFTNLGVTD SDVKKRDGF |
|