Gene
| Gene Model ID | pfu_aug2.0_1189.1_31502 |
|---|---|
| Locus | scaffold1189.1 : 94556 ... 99071 : + |
| To GenomeBrowser | scaffold1189.1:94556..99071 |
| Genes list of scaffold | scaffold1189.1 |
| Synonym | pfu_aug1.0_8644.1_60477 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1189.1_31502.t1 | 1 | 1 | BTB | 23 | 99 | 7.0e-15 | 54.9 | 2.4e-18 | 1.2e-14 | 54.2 |
| pfu_aug2.0_1189.1_31502.t1 | 1 | 1 | PHR | 135 | 277 | 1.2e-18 | 67.6 | 4.6e-22 | 2.3e-18 | 66.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1189.1_31502.t1 | gi|524871202|ref|XP_005092377.1| | PREDICTED: BTB/POZ domain-containing protein 6-like isoform X1 [Aplysia californica] | 1.0e-10 |
| pfu_aug2.0_1189.1_31502.t1 | gi|736155631|ref|XP_010770821.1| | PREDICTED: BTB/POZ domain-containing protein 1 isoform X2 [Notothenia coriiceps] | 4.0e-09 |
| pfu_aug2.0_1189.1_31502.t1 | gi|736155628|ref|XP_010770815.1| | PREDICTED: BTB/POZ domain-containing protein 1 isoform X1 [Notothenia coriiceps] | 4.0e-09 |
| pfu_aug2.0_1189.1_31502.t1 | gi|545508722|ref|XP_005623945.1| | PREDICTED: BTB/POZ domain-containing protein 6 [Canis lupus familiaris] | 5.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_1189.1_31502.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31502.t1 atggcatcctccgacgtggaacactggcaatgtgacaagtccctttcacaatgtatgtcatacatgttggccaatcagat catgtgtgacgtcacattcctgctaggggaggatcgtcttgaagtacacgcccacaagtacatgttggccagtcgcagtc ctgtttttcttgctatgctcgaaggaccaatggcagagaaagggaaaattgaaatccctgatatagaaaaggatatcttt catatttttctaagatactttgcagaggcaatgattgaatccaaactgctttcggatcaagagaaagtagaaatcatgta ctatcatgctgttaacaaacctgcatgtggtaatttgttcaactgcagcaaaagatgcagacggcaggttgagagagtag tacgatttgcctcccattgtcacggttcatggaatttgaatggactggaagatgctgttggattccaaacgagtcatgat tctattcttcatggtatcttagtttatggaagtgcctcaaagccttgcacatactcagtcgttacaagaataaaagattc aaatggttctcttcaatccatgaccgaaactagtatagactcgaacgaagacatagaattccatgaaataaagttcaggg accaagtaaatatcaaagcggacacagcctatcgtgtggaagtcttgatgacaggatcgtgctcaaaatctggcaagttt gggaaaacggtgattaggtttggaaatggtataaagaaagtgatattcttcaggtctacaccttcgccgaataaaacgaa tgaaatatcgggacaaattcctggtctactgttggaataa |
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Protein
| Protein ID | pfu_aug2.0_1189.1_31502.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31502.t1 MASSDVEHWQCDKSLSQCMSYMLANQIMCDVTFLLGEDRLEVHAHKYMLASRSPVFLAMLEGPMAEKGKIEIPDIEKDIF HIFLRYFAEAMIESKLLSDQEKVEIMYYHAVNKPACGNLFNCSKRCRRQVERVVRFASHCHGSWNLNGLEDAVGFQTSHD SILHGILVYGSASKPCTYSVVTRIKDSNGSLQSMTETSIDSNEDIEFHEIKFRDQVNIKADTAYRVEVLMTGSCSKSGKF GKTVIRFGNGIKKVIFFRSTPSPNKTNEISGQIPGLLLE |
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