Gene
| Gene Model ID | pfu_aug2.0_1189.1_31504 |
|---|---|
| Locus | scaffold1189.1 : 122746 ... 128153 : + |
| To GenomeBrowser | scaffold1189.1:122746..128153 |
| Genes list of scaffold | scaffold1189.1 |
| Synonym | pfu_aug1.0_8644.1_60476 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1189.1_31504.t1 | 2 | 1 | BTB | 22 | 125 | 1.9e-24 | 85.7 | 9.1e-28 | 3.4e-24 | 84.9 |
| pfu_aug2.0_1189.1_31504.t1 | 3 | 1 | BACK | 76 | 91 | 1.0e-12 | 47.7 | 2.8 | 10000.0 | -3.7 |
| pfu_aug2.0_1189.1_31504.t1 | 3 | 1 | PHR | 90 | 171 | 7.2e-21 | 74.9 | 0.019 | 69.0 | 3.5 |
| pfu_aug2.0_1189.1_31504.t1 | 3 | 2 | BACK | 100 | 127 | 1.0e-12 | 47.7 | 0.0065 | 24.0 | 4.8 |
| pfu_aug2.0_1189.1_31504.t1 | 2 | 2 | BTB | 126 | 157 | 1.9e-24 | 85.7 | 0.22 | 830.0 | 0.0 |
| pfu_aug2.0_1189.1_31504.t1 | 3 | 3 | BACK | 134 | 240 | 1.0e-12 | 47.7 | 3.3e-14 | 1.2e-10 | 41.0 |
| pfu_aug2.0_1189.1_31504.t1 | 3 | 2 | PHR | 145 | 183 | 7.2e-21 | 74.9 | 0.14 | 540.0 | 0.6 |
| pfu_aug2.0_1189.1_31504.t1 | 3 | 3 | PHR | 290 | 432 | 7.2e-21 | 74.9 | 2.0e-22 | 7.3e-19 | 68.4 |
Transcript
| Transcript ID | pfu_aug2.0_1189.1_31504.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31504.t1 atggcctcttctgacgtagaacattggcaatgtgacaagacgctcccacaatgtatgacttacatgttggacaatcagat cttgtgtgacgtcacattcctgctgggggaggagcgtcttgaagtccacgcccacaaatacatgttggccagtcggagtc ctgttttccatgcaatgctggacggaccaatggcagagagggggaaaattgaaattcccgatatagagaaagacattttc gatgtctttcttagatatgtgtacacagataatgtatctgtcacggttgacaatgtcctcaaggtcatgtacgcctccaa gaagtactgtgtagatctactcacaaaacagtgtaatgattttgtaaagaaaaatatcaccaatgagaacgcatgcgtgt tgatggattctgccttaatgctccaagaagaggacatttacaagtcatgtttggagaagatcaaggacaacacagaatca tgtatccgaagtccaggttttacaacaataaccaaagagacactgaaatcaatcacagaacttgatgaagttgctataaa agaggaagtcctttttgagcaggtgatgaaatggtgcgatgctgaatgtaagcgtcaacaattgaaggtcatgtgggaaa ataaaagaacagttttaggtgacatactttatgacatcagatttccgttgatggatccaaagtactttgcagagaaagtt ggtggggctgaactgctgacagacaaagagaaagttgaaataatgtactttcattcattgaacaaagctttttctagtaa aattttcaggtatagcgaaagattgaaacggaagatagatattgaaacgacgttagagagagtaatacgattccctccta atttcacacagcaatggagcttggacggaccggcagatgccattgtattttcaacaagtcatgattcagaattccatggt attctaatttacggtactatatcagctccatgtacatattcggttgaagtaacgttaagggattacacgggacttctttt cactgacaaaagtagcatacatacaaccaagagattacaaatgtatgaatacaaatttaaggagcctgtgaagataagag ctaatgagatgtacaatatggaacttaaaatgcttggaagtcagttttccaaagctggaagaaatgggaacataactgtt accttcggaaatgggcagaagtcggttacattttctgactctgctttttcaatgaatggaacaaatcaataccaaggaca aatacccggtcttttgttgagttag |
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Protein
| Protein ID | pfu_aug2.0_1189.1_31504.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31504.t1 MASSDVEHWQCDKTLPQCMTYMLDNQILCDVTFLLGEERLEVHAHKYMLASRSPVFHAMLDGPMAERGKIEIPDIEKDIF DVFLRYVYTDNVSVTVDNVLKVMYASKKYCVDLLTKQCNDFVKKNITNENACVLMDSALMLQEEDIYKSCLEKIKDNTES CIRSPGFTTITKETLKSITELDEVAIKEEVLFEQVMKWCDAECKRQQLKVMWENKRTVLGDILYDIRFPLMDPKYFAEKV GGAELLTDKEKVEIMYFHSLNKAFSSKIFRYSERLKRKIDIETTLERVIRFPPNFTQQWSLDGPADAIVFSTSHDSEFHG ILIYGTISAPCTYSVEVTLRDYTGLLFTDKSSIHTTKRLQMYEYKFKEPVKIRANEMYNMELKMLGSQFSKAGRNGNITV TFGNGQKSVTFSDSAFSMNGTNQYQGQIPGLLLS |
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