Gene
| Gene Model ID | pfu_aug2.0_1189.1_31505 |
|---|---|
| Locus | scaffold1189.1 : 132276 ... 134964 : + |
| To GenomeBrowser | scaffold1189.1:132276..134964 |
| Genes list of scaffold | scaffold1189.1 |
| Synonym | pfu_aug1.0_8644.1_60477 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1189.1_31505.t1 | 1 | 1 | BACK | 7 | 108 | 4.9e-07 | 29.5 | 7.6e-10 | 2.3e-06 | 27.3 |
| pfu_aug2.0_1189.1_31505.t1 | 2 | 1 | PHR | 153 | 269 | 8.2e-26 | 90.9 | 5.7e-17 | 1.7e-13 | 51.0 |
| pfu_aug2.0_1189.1_31505.t1 | 2 | 2 | PHR | 287 | 382 | 8.2e-26 | 90.9 | 3.9e-13 | 1.2e-09 | 38.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1189.1_31505.t1 | gi|488579038|ref|XP_004474987.1| | PREDICTED: BTB/POZ domain-containing protein 6 [Dasypus novemcinctus] | 3.0e-28 |
| pfu_aug2.0_1189.1_31505.t1 | gi|589950846|ref|XP_006988074.1| | PREDICTED: BTB/POZ domain-containing protein 6 [Peromyscus maniculatus bairdii] | 7.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_1189.1_31505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31505.t1 atgcgtgttgatggatctgctttactccttcaagaagaggacatttacaaattatgcatggataaaataaaagaaaacgc agaagtatgtgtcaaagctgcaagtttttctaccataagcagacagacactaaaggcaatcacagatttagactatgcta atattaaagaagaaattttgtatgagcaggtcatgaaatggtgtgatgctgaatgtgtgcgtcaacaattggaggtcacg tgggaaaataaaagaatattattggacgacatactttatgacatcaggtttccgttgatggatccaagatactttgcaga ggcaatgattgaatccaaactgctttcggatcaagagaaagtagaaatcatgtactatcatgctgttaacaaccctgcgt gtggtaatttgttcaattgtagcaaaagatgcagtcggcaggttgagagagtagtacgatttgcctcccattgtcacggt tcatggaatttgaatggactggaagatgctgttggattccaaacgagtcataactctcttcttcatggtatcatagttta tggaagtgcctcgaagccttgcacatactcagttgtgacaaggatcaaagattcaaatggttctcttctttccatgaccg aaactagtatagactcgaacgaagacatagaattccatgacataaagttcagggaccaagtaaatatcaaagctgacgca gcctatcgtgtggaagtcttgatgacaggatcgtgctcaaaatctggcaagtttgggaaaacggtgattaggtttggaaa tggtataaagaaagtgatattcttcagcaagcgaagaaacaagatagaaagagtgataagatttctctcaaaatccacga gtaaatggagtttgaatggactagaggatgccctgggatttaagacaagtcaggattcactgatccatggtattctagtg tatggttcagcctccgtgtcgtgtacatacacagttgaaataagattaaaagacgggtcgggaagtattctttcgaaaat agagactaatatagaatcaaataaagacatacaataccatgatatcaaattcatggaaccagtaaacattaaagccagca agaactatcgtattgagcttttgatgcgaatcgaaagcagggaccaatag |
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Protein
| Protein ID | pfu_aug2.0_1189.1_31505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1189.1_31505.t1 MRVDGSALLLQEEDIYKLCMDKIKENAEVCVKAASFSTISRQTLKAITDLDYANIKEEILYEQVMKWCDAECVRQQLEVT WENKRILLDDILYDIRFPLMDPRYFAEAMIESKLLSDQEKVEIMYYHAVNNPACGNLFNCSKRCSRQVERVVRFASHCHG SWNLNGLEDAVGFQTSHNSLLHGIIVYGSASKPCTYSVVTRIKDSNGSLLSMTETSIDSNEDIEFHDIKFRDQVNIKADA AYRVEVLMTGSCSKSGKFGKTVIRFGNGIKKVIFFSKRRNKIERVIRFLSKSTSKWSLNGLEDALGFKTSQDSLIHGILV YGSASVSCTYTVEIRLKDGSGSILSKIETNIESNKDIQYHDIKFMEPVNIKASKNYRIELLMRIESRDQ |
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