Gene
| Gene Model ID | pfu_aug2.0_1190.1_01455 |
|---|---|
| Locus | scaffold1190.1 : 11436 ... 17700 : + |
| To GenomeBrowser | scaffold1190.1:11436..17700 |
| Genes list of scaffold | scaffold1190.1 |
| Synonym | pfu_aug1.0_2159.1_58803 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger ran-binding domain-containing protein 2-like isoform x2 | GO:0003723 GO:0005634 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1190.1_01455.t1 | 1 | 1 | zf-RanBP | 58 | 86 | 1.6e-08 | 33.5 | 6.6e-12 | 2.5e-08 | 32.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1190.1_01455.t1 | gi|524884656|ref|XP_005098947.1| | PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Aplysia californica] | 6.02558e-44 |
| pfu_aug2.0_1190.1_01455.t1 | gi|524884654|ref|XP_005098946.1| | PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X1 [Aplysia californica] | 7.9874e-44 |
| pfu_aug2.0_1190.1_01455.t1 | gi|736262861|ref|XP_010790287.1| | PREDICTED: zinc finger Ran-binding domain-containing protein 2 isoform X2 [Notothenia coriiceps] | 4.0e-32 |
| pfu_aug2.0_1190.1_01455.t1 | gi|217416456|ref|NP_001136134.1| | zinc finger Ran-binding domain-containing protein 2 [Xenopus (Silurana) tropicalis] | 5.0e-32 |
| pfu_aug2.0_1190.1_01455.t1 | gi|499021513|ref|XP_004561533.1| | 7.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_1190.1_01455.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1190.1_01455.t1 atggtcaataaattgggagaaaagatactattttgctttgggactggggccgaatatgggccccaaattcggcttataga gagccctttaggaaaaaaagatggaattgttttcaagaaaggtggcacagaaattgggaaacagatggcagagaaaagta aagggttatttagtgcggaggattggcagtgtaagagttgtggaaatgtgaactgggctcgcaggatgacgtgtaatatg tgtaatgctccaaagtacggaaaacaagagcagagaacaggttttggaggagggtacatggaaagagacgaggtagttga gtatgttgagaggaaagacgacgatgaatacgatgaggatgaagatgatgacgatgaagacgatgatgatgctgatcttg gtgcctatgacttagatgctagtgatgatgacgatgacaaaaaagatgataagaaagnggtcattttggcatgggggaaa tttccgcgaagttcattgattcgtgacgatgaagatgatgatgatgaagacgatgatgatgctgatcttggtgcctatga cttagatgctagcgatgatgacgatgacaaaaaagatgataagaaggaagaaaagggacgatctgcatccaggtcctcct catcaagaagctcctctaggtcatcaagatcttcaaggtcatattcatccaggagcaggtcgtcttcaaggtcaagctcc agatccaggtcacgctccaattcaagatctgggagaaggagcaaacgaaggtctaggtccagaacatttgactataattg tcattgtatacaacgtagaagcgtgaagattgtaagagatccagatccaggtcacccatccgcgattccagatctcgttc acgatccaggtcacgagagaaaagatcaaggcggtcgagatcttagttcagagaagaagacatag |
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Protein
| Protein ID | pfu_aug2.0_1190.1_01455.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1190.1_01455.t1 MVNKLGEKILFCFGTGAEYGPQIRLIESPLGKKDGIVFKKGGTEIGKQMAEKSKGLFSAEDWQCKSCGNVNWARRMTCNM CNAPKYGKQEQRTGFGGGYMERDEVVEYVERKDDDEYDEDEDDDDEDDDDADLGAYDLDASDDDDDKKDDKKXVILAWGK FPRSSLIRDDEDDDDEDDDDADLGAYDLDASDDDDDKKDDKKEEKGRSASRSSSSRSSSRSSRSSRSYSSRSRSSSRSSS RSRSRSNSRSGRRSKRRSRSRTFDYNCHCIQRRSVKIVRDPDPGHPSAIPDLVHDPGHERKDQGGRDLSSEKKT |
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