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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1190.1_01457
Locus scaffold1190.1 : 30802 ... 70105 : -
To GenomeBrowser scaffold1190.1:30802..70105
Genes list of scaffold scaffold1190.1
Synonym pfu_aug1.0_11376.1_24886

Manual annotation
Annotation by Blast2GO
Annotation GO
transient receptor potential cation channel subfamily a member 1-like GO:0006810 GO:0044699 GO:0050896

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1190.1_01457.t1 11 1 Ank_2 55 146 0.0 454.7 1.0e-16 1.8e-13 50.5
pfu_aug2.0_1190.1_01457.t1 16 1 Ank_4 57 102 0.0 288.7 0.0004 0.74 10.4
pfu_aug2.0_1190.1_01457.t1 21 1 Ank_3 57 73 0.0 265.5 1.4 2700.0 -0.8
pfu_aug2.0_1190.1_01457.t1 15 1 Ank_5 67 111 0.0 324.8 2.8e-05 0.051 13.8
pfu_aug2.0_1190.1_01457.t1 21 2 Ank_3 82 109 0.0 265.5 0.00013 0.23 11.7
pfu_aug2.0_1190.1_01457.t1 20 1 Ank 82 112 0.0 374.2 4.1e-05 0.076 12.8
pfu_aug2.0_1190.1_01457.t1 15 2 Ank_5 101 153 0.0 324.8 6.4e-11 1.2e-07 31.7
pfu_aug2.0_1190.1_01457.t1 16 2 Ank_4 117 169 0.0 288.7 8.1e-14 1.5e-10 41.2
pfu_aug2.0_1190.1_01457.t1 21 3 Ank_3 118 143 0.0 265.5 3.1e-08 5.7e-05 22.9
pfu_aug2.0_1190.1_01457.t1 20 2 Ank 118 146 0.0 374.2 9.2e-10 1.7e-06 27.5
pfu_aug2.0_1190.1_01457.t1 11 2 Ank_2 120 213 0.0 454.7 2.9e-27 5.3e-24 84.3
pfu_aug2.0_1190.1_01457.t1 20 3 Ank 150 180 0.0 374.2 2.4e-10 4.5e-07 29.3
pfu_aug2.0_1190.1_01457.t1 16 3 Ank_4 151 202 0.0 288.7 5.4e-15 1.0e-11 45.0
pfu_aug2.0_1190.1_01457.t1 21 4 Ank_3 151 178 0.0 265.5 3.4e-10 6.2e-07 29.0
pfu_aug2.0_1190.1_01457.t1 15 3 Ank_5 151 183 0.0 324.8 2.8e-09 5.3e-06 26.5
pfu_aug2.0_1190.1_01457.t1 15 4 Ank_5 180 222 0.0 324.8 6.1e-07 0.0011 19.0
pfu_aug2.0_1190.1_01457.t1 20 4 Ank 182 213 0.0 374.2 3.2e-09 6.0e-06 25.8
pfu_aug2.0_1190.1_01457.t1 21 5 Ank_3 185 210 0.0 265.5 4.4e-06 0.0081 16.3
pfu_aug2.0_1190.1_01457.t1 16 4 Ank_4 186 233 0.0 288.7 2.4e-05 0.044 14.3
pfu_aug2.0_1190.1_01457.t1 11 3 Ank_2 213 309 0.0 454.7 8.7e-15 1.6e-11 44.3
pfu_aug2.0_1190.1_01457.t1 20 5 Ank 217 238 0.0 374.2 0.24 440.0 0.9
pfu_aug2.0_1190.1_01457.t1 21 6 Ank_3 218 238 0.0 265.5 0.069 130.0 3.3
pfu_aug2.0_1190.1_01457.t1 16 5 Ank_4 261 299 0.0 288.7 1.3e-08 2.4e-05 24.7
pfu_aug2.0_1190.1_01457.t1 15 5 Ank_5 270 319 0.0 324.8 3.0e-12 5.6e-09 35.9
pfu_aug2.0_1190.1_01457.t1 21 7 Ank_3 279 307 0.0 265.5 2.5e-10 4.7e-07 29.4
pfu_aug2.0_1190.1_01457.t1 20 6 Ank 279 310 0.0 374.2 2.0e-11 3.7e-08 32.7
pfu_aug2.0_1190.1_01457.t1 11 4 Ank_2 292 374 0.0 454.7 3.4e-16 6.3e-13 48.8
pfu_aug2.0_1190.1_01457.t1 16 6 Ank_4 313 364 0.0 288.7 2.0e-08 3.7e-05 24.1
pfu_aug2.0_1190.1_01457.t1 15 6 Ank_5 313 352 0.0 324.8 3.2e-06 0.0059 16.8
pfu_aug2.0_1190.1_01457.t1 21 8 Ank_3 315 339 0.0 265.5 0.0073 14.0 6.3
pfu_aug2.0_1190.1_01457.t1 20 7 Ank 315 342 0.0 374.2 2.2e-06 0.004 16.8
pfu_aug2.0_1190.1_01457.t1 11 5 Ank_2 316 407 0.0 454.7 1.6e-21 3.0e-18 65.9
pfu_aug2.0_1190.1_01457.t1 21 9 Ank_3 346 373 0.0 265.5 0.00014 0.26 11.6
pfu_aug2.0_1190.1_01457.t1 20 8 Ank 346 375 0.0 374.2 1.7e-08 3.2e-05 23.5
pfu_aug2.0_1190.1_01457.t1 15 7 Ank_5 346 375 0.0 324.8 0.00081 1.5 9.1
pfu_aug2.0_1190.1_01457.t1 11 6 Ank_2 352 435 0.0 454.7 2.4e-19 4.4e-16 59.0
pfu_aug2.0_1190.1_01457.t1 15 8 Ank_5 366 418 0.0 324.8 2.1e-10 3.9e-07 30.1
pfu_aug2.0_1190.1_01457.t1 16 7 Ank_4 370 398 0.0 288.7 5.9e-07 0.0011 19.4
pfu_aug2.0_1190.1_01457.t1 16 8 Ank_4 379 430 0.0 288.7 6.0e-09 1.1e-05 25.7
pfu_aug2.0_1190.1_01457.t1 21 10 Ank_3 379 404 0.0 265.5 3.0e-06 0.0055 16.8
pfu_aug2.0_1190.1_01457.t1 20 9 Ank 379 408 0.0 374.2 8.8e-08 0.00016 21.2
pfu_aug2.0_1190.1_01457.t1 20 10 Ank 412 434 0.0 374.2 4.7e-05 0.088 12.6
pfu_aug2.0_1190.1_01457.t1 15 9 Ank_5 413 435 0.0 324.8 0.00021 0.39 11.0
pfu_aug2.0_1190.1_01457.t1 16 9 Ank_4 413 466 0.0 288.7 2.6e-08 4.8e-05 23.7
pfu_aug2.0_1190.1_01457.t1 21 11 Ank_3 413 434 0.0 265.5 9.8e-05 0.18 12.1
pfu_aug2.0_1190.1_01457.t1 11 7 Ank_2 415 490 0.0 454.7 1.5e-17 2.8e-14 53.2
pfu_aug2.0_1190.1_01457.t1 15 10 Ank_5 430 486 0.0 324.8 2.4e-11 4.5e-08 33.0
pfu_aug2.0_1190.1_01457.t1 21 12 Ank_3 447 471 0.0 265.5 9.0e-05 0.17 12.2
pfu_aug2.0_1190.1_01457.t1 20 11 Ank 447 476 0.0 374.2 3.7e-08 6.8e-05 22.4
pfu_aug2.0_1190.1_01457.t1 16 10 Ank_4 448 487 0.0 288.7 1.3e-09 2.5e-06 27.8
pfu_aug2.0_1190.1_01457.t1 21 13 Ank_3 478 488 0.0 265.5 0.0044 8.2 7.0
pfu_aug2.0_1190.1_01457.t1 20 12 Ank 478 490 0.0 374.2 8.1e-05 0.15 11.9
pfu_aug2.0_1190.1_01457.t1 11 8 Ank_2 515 610 0.0 454.7 1.8e-14 3.3e-11 43.3
pfu_aug2.0_1190.1_01457.t1 15 11 Ank_5 538 585 0.0 324.8 1.0e-09 1.9e-06 27.9
pfu_aug2.0_1190.1_01457.t1 21 14 Ank_3 546 574 0.0 265.5 9.9e-06 0.018 15.2
pfu_aug2.0_1190.1_01457.t1 20 13 Ank 546 577 0.0 374.2 1.7e-10 3.2e-07 29.8
pfu_aug2.0_1190.1_01457.t1 16 11 Ank_4 547 591 0.0 288.7 3.6e-08 6.8e-05 23.2
pfu_aug2.0_1190.1_01457.t1 21 15 Ank_3 581 608 0.0 265.5 0.00021 0.38 11.1
pfu_aug2.0_1190.1_01457.t1 20 14 Ank 581 611 0.0 374.2 9.2e-07 0.0017 18.0
pfu_aug2.0_1190.1_01457.t1 11 9 Ank_2 589 668 0.0 454.7 8.1e-15 1.5e-11 44.4
pfu_aug2.0_1190.1_01457.t1 16 12 Ank_4 595 633 0.0 288.7 6.7e-09 1.2e-05 25.6
pfu_aug2.0_1190.1_01457.t1 15 12 Ank_5 599 653 0.0 324.8 4.1e-15 7.5e-12 45.0
pfu_aug2.0_1190.1_01457.t1 21 16 Ank_3 614 635 0.0 265.5 0.001 1.9 8.9
pfu_aug2.0_1190.1_01457.t1 20 15 Ank 614 635 0.0 374.2 5.5e-06 0.01 15.6
pfu_aug2.0_1190.1_01457.t1 16 13 Ank_4 642 662 0.0 288.7 0.037 69.0 4.1
pfu_aug2.0_1190.1_01457.t1 15 13 Ank_5 646 673 0.0 324.8 0.00069 1.3 9.4
pfu_aug2.0_1190.1_01457.t1 21 17 Ank_3 646 667 0.0 265.5 0.0058 11.0 6.6
pfu_aug2.0_1190.1_01457.t1 20 16 Ank 646 675 0.0 374.2 0.00043 0.79 9.6
pfu_aug2.0_1190.1_01457.t1 11 10 Ank_2 676 759 0.0 454.7 8.2e-15 1.5e-11 44.4
pfu_aug2.0_1190.1_01457.t1 15 14 Ank_5 687 734 0.0 324.8 4.6e-10 8.5e-07 29.0
pfu_aug2.0_1190.1_01457.t1 21 18 Ank_3 695 723 0.0 265.5 4.8e-06 0.0089 16.1
pfu_aug2.0_1190.1_01457.t1 20 17 Ank 695 726 0.0 374.2 6.0e-11 1.1e-07 31.2
pfu_aug2.0_1190.1_01457.t1 16 14 Ank_4 696 740 0.0 288.7 1.1e-08 2.1e-05 24.9
pfu_aug2.0_1190.1_01457.t1 21 19 Ank_3 730 757 0.0 265.5 0.00021 0.38 11.1
pfu_aug2.0_1190.1_01457.t1 20 18 Ank 730 760 0.0 374.2 9.2e-07 0.0017 18.0
pfu_aug2.0_1190.1_01457.t1 11 11 Ank_2 735 816 0.0 454.7 1.6e-15 3.0e-12 46.7
pfu_aug2.0_1190.1_01457.t1 16 15 Ank_4 744 782 0.0 288.7 2.6e-09 4.8e-06 26.9
pfu_aug2.0_1190.1_01457.t1 15 15 Ank_5 748 802 0.0 324.8 1.2e-15 2.3e-12 46.7
pfu_aug2.0_1190.1_01457.t1 21 20 Ank_3 763 784 0.0 265.5 0.00027 0.49 10.7
pfu_aug2.0_1190.1_01457.t1 20 19 Ank 763 784 0.0 374.2 1.4e-06 0.0025 17.5
pfu_aug2.0_1190.1_01457.t1 16 16 Ank_4 791 811 0.0 288.7 0.037 69.0 4.1
pfu_aug2.0_1190.1_01457.t1 21 21 Ank_3 795 816 0.0 265.5 0.0067 12.0 6.4
pfu_aug2.0_1190.1_01457.t1 20 20 Ank 795 816 0.0 374.2 0.0013 2.3 8.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1190.1_01457.t1 gi|585714572|ref|XP_006812882.1| PREDICTED: transient receptor potential cation channel subfamily A member 1-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_1190.1_01457.t1 gi|585713128|ref|XP_002741541.2| PREDICTED: transient receptor potential cation channel subfamily A member 1-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_1190.1_01457.t1 gi|390343901|ref|XP_783557.2| 0.0
pfu_aug2.0_1190.1_01457.t1 gi|585660268|ref|XP_006816351.1| PREDICTED: transient receptor potential cation channel subfamily A member 1-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_1190.1_01457.t1 gi|390343907|ref|XP_780672.3| 0.0

Transcript
Transcript IDpfu_aug2.0_1190.1_01457.t1
Definition-
>pfu_aug2.0_1190.1_01457.t1
atggaacaaaagggaattccgtcacctgagattaaaattacaagtccgggcaatattagtgggaaattcaaattttggtc
ggttacgtcgtccatctacccagcacataaagcaaagtcgcctcacggagatgatgaaagtcacgacatttccctatggc
aggtattacgagagaatgataaagagacattggagagcctgcttgaaaagcacccagaatatattcacgacacggacagt
actgggaatggggtacttcatattgtcagcaagtacaacgccatcaaacttgccgaaatcttaatcagacataaagcaga
cgtacaccagaaatccaatccgtatgaagtatcaccacttcataccgccgccaaaaacaactctgttgatctttgtcgtt
tgctgctggagaatggagccaaaattgatgtacgcgactgtaaaatgaagacacctctccattatgccgcacgacgggga
aatttggaagtactagagtatttattaaagaacggaaaatgtgacgtaaatatggttgacgaggacgacataacaccact
tcatgaagcagtactacacagacatccaaaactggttccacgacttattcaatacggtgccgacgtcaaagcaagagacg
tcaatgaatcgactccttttcttttcgctgcggcagagggaatgattgagacaataaagcatatcattcaagcagacaca
gtagataatatagtatctgcgtcatataatggaaatgccgatggtaaaaaaggaagtcacatgttggagaaaggagtcag
ggaaaataaagtggtacatcaaaaagataacgagggaaacacagcactacatcttgccatacaaaacaatcaacttgaga
cggtggaatatttgcttaaaataggatgtgacgtcaatgaacacaataatctgaaccttgctcccctacacgtggcggca
gtgactggtaacgtggtcattgtccagtccctgttggccagtggtgctacagtagatgtccgggatacagattttatgac
gccaatacacagggctgcattatacgataaaacaaatgtgctagaaaagcttatggattgtggaggtaatatcaatgcca
aaaccagaagccagatgacggcgttgttggtggccgtgtggaagggacatatccaaaccgtacagttcctgttggacaat
ggtgctcaaattaccgaaacggacagcaaaatgaaaacggcgcttcactttgccgtggagtctggacgtaacgatatact
tcttattcttttaaagcatggtgatcagcatttactaaagagtcttgattatgcagaccagacggttctacattatgccg
ctaagcttggagacactgtgatcataaagacattaatacatcatggatccgagtccaatgcacgtgatcaagatggcaat
accccattacatattgcagccatagaagacaaggcccctaccactgtcctctctgaatatcggtcggactcctcgggtga
tagcatgcatcagctcgctacagccgcagagaacggaccgtattcgaattgtcgtaacgatgctattgaagctttgacaa
atgcaagccaagaggaaataaatgacggagacgatgatggactaacaccgctgatgaaagccgctgtttcaggaaatagt
ggcaccgtcaaacttttacttagcaaaggtggcgatatatcagcgagggacgagaactgttgcactgccttgttgttggt
atcacgtaaaggtcttgctgacgtcatgaatatcttactggataattatgcagatataaatgctacagataaacaaaaga
acacatcccttcatttggcttgttatggcggacatgcagcgtgtgcctccttacttctccgacgctactgtaaagccaca
ctgaggaacgcctctggtaaaacaccgttagatctggcaatagacggtagacacacagaggtggcagtggaactactaag
tgacgaaaataggaattgtcgtaacgacgctattgaagctttgacaaatgcaagccaagaggaaataaatgacggagacg
atgatggactaacaccgctgatgaaagccgctatatcaggaaatagtggcaccgtcaaacttttacttagcaaaggtggc
gatatatcagcgagggacgagaactgttgcactgccttgttgttggtgtcacgtaaaggtcttgctgacgtcatgaatat
cttactggataattatgcagatattaatgctacagataaacaaaagaacacatcccttcatttggcctgttatggcggac
atgcagcgtgtgtctccttacttctccgacgctactgtaaagccacactgaggaacgcctctggtaaaacaccgttagat
ctggcaatagacggtagacacacagaggtggcagtggaactacttagtgacgaaaataggtggcaagaaataatggatgc
caaagataggaaaggaaaaggaccaatggaagccctaatcgaaaaagttcctgatgcgtttctggttgtgatgaacagat
gtacagtgagatcacatcataccaaggacgatgacgactacactataaagtataactttaagtacatcgaccctggtcct
cccaaagacaaaccgggatggcagatctccaaacgttactacgcactcgatacgatggttaaatttcggcgcgaagaact
gttgtcacatccgctagcccagcacttacttattttgaaatggaggaaatttggacgatttcagttctacgccaatttgt
ttatgtacatagtgtacttaatactccaaaccctttataccctcttcattcctaaaataaagaccaatctgttggacaat
gtccggcgctgcccagtgtacctgaccgcagaagaacaaaacaaccaaacggcaatagacattaaagttaaagctgctgc
atactcatactatcccgtggtgagtctggcgatcaccgtcatcgccgccatcttgtttatatttctactgatatttgctg
ctcaacaaatctacaatatcattactctgggctggcgttatttcttgcatccgacctatattctgacagacattatgcta
ataacgacttcactgtatttgattaatatatcggtgcttccatgtgagaacgaattccgcagtgggtggatttcatcgtt
cgtggcttggatagtaattatgatgtacttaaggagcttaggcggcattggtatctattttgttatgtttgaggaagtca
tgatttcattattaaaggtatctgtggttctgatactatttgtgatggctttcagtcaagctggctccgtgactcttgca
atgagggatggtttcggagagttcgacccctcgccgttagcggtgtttgccatgacgttaggggagctgaattatataga
cacattcgtgacctcagataacagtcccttcacgacagataactatatcctcgtcaccatcttcatgtttgttatgccta
tagccttaatgaacctattgataggtgtcgctgttggagacattgaaaaaattcagaagcaagcatatcttacaaaaatc
aaaattcaggtttcagacctgtgtagaacagaagaaaggtttcctttgtatttccaaagaaaactatacagacaatacga
cgaaataaaaccaaacttagctcgcaagtcattcttcaaccggttataccgaaggataaccggtgttgacagtactacca
cattcattaaagaggagagacaggatcctctgaaaaacctggtcactgaaatcagagaggaaatacgcagaagtaaagtg
ggaatggcacatgtacagagtacactgattcagacccaggagatgatgaagtctatgtgtgaacagatgaatgtagacta
tagactggatactgcctcggtgttatctgataggacagacctacatagccgacaagatttatga

Protein
Protein IDpfu_aug2.0_1190.1_01457.t1
Definition-
>pfu_aug2.0_1190.1_01457.t1
MEQKGIPSPEIKITSPGNISGKFKFWSVTSSIYPAHKAKSPHGDDESHDISLWQVLRENDKETLESLLEKHPEYIHDTDS
TGNGVLHIVSKYNAIKLAEILIRHKADVHQKSNPYEVSPLHTAAKNNSVDLCRLLLENGAKIDVRDCKMKTPLHYAARRG
NLEVLEYLLKNGKCDVNMVDEDDITPLHEAVLHRHPKLVPRLIQYGADVKARDVNESTPFLFAAAEGMIETIKHIIQADT
VDNIVSASYNGNADGKKGSHMLEKGVRENKVVHQKDNEGNTALHLAIQNNQLETVEYLLKIGCDVNEHNNLNLAPLHVAA
VTGNVVIVQSLLASGATVDVRDTDFMTPIHRAALYDKTNVLEKLMDCGGNINAKTRSQMTALLVAVWKGHIQTVQFLLDN
GAQITETDSKMKTALHFAVESGRNDILLILLKHGDQHLLKSLDYADQTVLHYAAKLGDTVIIKTLIHHGSESNARDQDGN
TPLHIAAIEDKAPTTVLSEYRSDSSGDSMHQLATAAENGPYSNCRNDAIEALTNASQEEINDGDDDGLTPLMKAAVSGNS
GTVKLLLSKGGDISARDENCCTALLLVSRKGLADVMNILLDNYADINATDKQKNTSLHLACYGGHAACASLLLRRYCKAT
LRNASGKTPLDLAIDGRHTEVAVELLSDENRNCRNDAIEALTNASQEEINDGDDDGLTPLMKAAISGNSGTVKLLLSKGG
DISARDENCCTALLLVSRKGLADVMNILLDNYADINATDKQKNTSLHLACYGGHAACVSLLLRRYCKATLRNASGKTPLD
LAIDGRHTEVAVELLSDENRWQEIMDAKDRKGKGPMEALIEKVPDAFLVVMNRCTVRSHHTKDDDDYTIKYNFKYIDPGP
PKDKPGWQISKRYYALDTMVKFRREELLSHPLAQHLLILKWRKFGRFQFYANLFMYIVYLILQTLYTLFIPKIKTNLLDN
VRRCPVYLTAEEQNNQTAIDIKVKAAAYSYYPVVSLAITVIAAILFIFLLIFAAQQIYNIITLGWRYFLHPTYILTDIML
ITTSLYLINISVLPCENEFRSGWISSFVAWIVIMMYLRSLGGIGIYFVMFEEVMISLLKVSVVLILFVMAFSQAGSVTLA
MRDGFGEFDPSPLAVFAMTLGELNYIDTFVTSDNSPFTTDNYILVTIFMFVMPIALMNLLIGVAVGDIEKIQKQAYLTKI
KIQVSDLCRTEERFPLYFQRKLYRQYDEIKPNLARKSFFNRLYRRITGVDSTTTFIKEERQDPLKNLVTEIREEIRRSKV
GMAHVQSTLIQTQEMMKSMCEQMNVDYRLDTASVLSDRTDLHSRQDL

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Okinawa Institute of Science and Technology
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