Gene
| Gene Model ID | pfu_aug2.0_1190.1_01461 |
|---|---|
| Locus | scaffold1190.1 : 120858 ... 140165 : - |
| To GenomeBrowser | scaffold1190.1:120858..140165 |
| Genes list of scaffold | scaffold1190.1 |
| Synonym | pfu_aug1.0_21312.1_40284 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nucleoprotein tpr | GO:0005515 GO:0005635 GO:0006886 GO:0007088 GO:0010605 GO:0016020 GO:0031324 GO:0033044 GO:0043234 GO:0044260 GO:0048518 GO:0050658 GO:0051170 GO:0051716 GO:0080090 GO:1902582 GO:1903047 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1190.1_01461.t1 | gi|742175662|ref|XP_010851372.1| | PREDICTED: nucleoprotein TPR [Bison bison bison] | 4.0e-23 |
| pfu_aug2.0_1190.1_01461.t1 | gi|594073551|ref|XP_006060592.1| | PREDICTED: nucleoprotein TPR [Bubalus bubalis] | 4.0e-23 |
| pfu_aug2.0_1190.1_01461.t1 | gi|594624892|ref|XP_007167035.1| | PREDICTED: nucleoprotein TPR isoform X2 [Balaenoptera acutorostrata scammoni] | 4.0e-23 |
| pfu_aug2.0_1190.1_01461.t1 | gi|329663673|ref|NP_001192552.1| | nucleoprotein TPR [Bos taurus] | 4.0e-23 |
| pfu_aug2.0_1190.1_01461.t1 | gi|557282016|ref|XP_006023941.1| | PREDICTED: nucleoprotein TPR isoform X3 [Alligator sinensis] | 4.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1190.1_01461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1190.1_01461.t1 atggccattgccccgacggcggccacacccattactgtcagtgtccccacccccacagcaactgtaatgccaactacggt acagcatgaaactacagaccaaggggatagcgtgtctcagttgtcaccagtaactacgtcacgacctacgcaacaagtac agagagttacacctcaggtggaaacatcaaacgatcaaccaattgttatagaagtagagagctcaaatcaacatgaagtc acctctgagcccccatctggtgttagtagtaccgtaaccacagtaacaggagaggtaactcctgctgtccaggctgtaac aagtacaagtcagctcggcaagagaacaagggaggagatggagagtcaggaagaagaaacagaggccaaaagaacaaaga caatcacaccacaggagtctcaagcggctgtaccatccatcactgtcacagacgagcacgctaacactacggccgtacca caagacggagagaaaatggaggaggacactgagactccagaggtagtgaccgtatcagagagtgatacctcacaagctgt gtcagctagagaatctcagtcctgtgttggtccctcagactctgtcatgtcaacaacctcagaggtgaccccaatgccca gtgcttctactacatcaacagaatctcaggaggtaataagtgacagcatacctgaggaatcgacacctgtcgtaacagag gagccttcccaggattccaatgccattataatcctagagagtgatgaagaggagtatggtgaggaagagccggaggagga ggaggaaggtgatgaggaggattatgaagaagtcggtgatgatgaagatgatgatcaagaggactatgaagaggacgagg atgacaatgatacgtcaggtgaagtgtcggagagtcaacaagatatgacggcacaaactcaggaatttgacgattatagt gtcgtagttgttgaggatgacaatgaaggtgatgttgaaagtcaacaagataatactcctgcctcgcctcagcgtcctgt aaccacggcagcatcaaatctcttcacgatgagaccagtgactggcatgcagccaatagaaaggcagacctcgatcacac gacagttaactcctttcataatagggagccatgcaggttttgaggatggtgaagatggtattgtacctagtacaccaact ttatgtataccaaatagaggggatggatatgctgaggttgtcagctctccccatgtgtccaatcagagatttacatttgg cagtttagcggatcaggcacaaagtcaatcagagcttgctcaactagcatcccaaggagctctaggtatggatgatacac gtatggatctatcacagttagaggaggggacaggtagaagtgtacccagcacccccctccattcctctgccccaacatct atcattactgagggtactgtggaatctaagttagcagccagaccggatgatgcccttactgaggccacacccagtacgtc tgagggggagacccagggggaaacagaacctcagtccgaaaggccagaggagggtgtagaggtagaggaggagcttgtag gggtggaggagttagaggacactatggattcagctctaggtatggatgatacacgtatggatctatcacagttagaggag gggacaggtagaagtgtacccagcacccccctccattcctccgccccaacgtctatcattactgagggtactgtggaatc taagctagcagccagaccggatgatgcccttactgaggccactcccagtacgtctgagggggagacgcagggggaaacag aacctcagtcggaaaggccagaggagggtgtagaggtagaggaggagcttgtaggggtagaggagttagaggacactatg gattcagggaataaagttgatagtgctacagctgaaaaagacgaggatggcgaggattcgacaccacaaccagaaaagtc agaacagagtgagaagcctaagatccagcctatagtgtgggagtcgtcatcctccagtagtccctcctcttctgtacaac cctcccagtcattccgaggacgtcagactgccatacgaggatcaggaatccctcagcgaggaatgaggcagcaccgagga ggattccagagaatgaggagtcctgtaccaaggcagcgaggagccagaggaggaaggggaggaggcatgtataggcctcc aatgttctaa |
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Protein
| Protein ID | pfu_aug2.0_1190.1_01461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1190.1_01461.t1 MAIAPTAATPITVSVPTPTATVMPTTVQHETTDQGDSVSQLSPVTTSRPTQQVQRVTPQVETSNDQPIVIEVESSNQHEV TSEPPSGVSSTVTTVTGEVTPAVQAVTSTSQLGKRTREEMESQEEETEAKRTKTITPQESQAAVPSITVTDEHANTTAVP QDGEKMEEDTETPEVVTVSESDTSQAVSARESQSCVGPSDSVMSTTSEVTPMPSASTTSTESQEVISDSIPEESTPVVTE EPSQDSNAIIILESDEEEYGEEEPEEEEEGDEEDYEEVGDDEDDDQEDYEEDEDDNDTSGEVSESQQDMTAQTQEFDDYS VVVVEDDNEGDVESQQDNTPASPQRPVTTAASNLFTMRPVTGMQPIERQTSITRQLTPFIIGSHAGFEDGEDGIVPSTPT LCIPNRGDGYAEVVSSPHVSNQRFTFGSLADQAQSQSELAQLASQGALGMDDTRMDLSQLEEGTGRSVPSTPLHSSAPTS IITEGTVESKLAARPDDALTEATPSTSEGETQGETEPQSERPEEGVEVEEELVGVEELEDTMDSALGMDDTRMDLSQLEE GTGRSVPSTPLHSSAPTSIITEGTVESKLAARPDDALTEATPSTSEGETQGETEPQSERPEEGVEVEEELVGVEELEDTM DSGNKVDSATAEKDEDGEDSTPQPEKSEQSEKPKIQPIVWESSSSSSPSSSVQPSQSFRGRQTAIRGSGIPQRGMRQHRG GFQRMRSPVPRQRGARGGRGGGMYRPPMF |
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