Gene
| Gene Model ID | pfu_aug2.0_1190.1_01462 |
|---|---|
| Locus | scaffold1190.1 : 140227 ... 163595 : - |
| To GenomeBrowser | scaffold1190.1:140227..163595 |
| Genes list of scaffold | scaffold1190.1 |
| Synonym | pfu_aug1.0_5716.1_23880 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1190.1_01462.t1 | 12 | 1 | TPR_MLP1_2 | 48 | 179 | 1.6e-29 | 102.3 | 0.00059 | 8.7 | 6.0 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 2 | TPR_MLP1_2 | 150 | 215 | 1.6e-29 | 102.3 | 0.0033 | 49.0 | 3.6 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 3 | TPR_MLP1_2 | 221 | 341 | 1.6e-29 | 102.3 | 0.0082 | 120.0 | 2.3 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 4 | TPR_MLP1_2 | 401 | 547 | 1.6e-29 | 102.3 | 0.00046 | 6.8 | 6.4 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 5 | TPR_MLP1_2 | 569 | 693 | 1.6e-29 | 102.3 | 3.9e-08 | 0.00057 | 19.6 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 6 | TPR_MLP1_2 | 710 | 798 | 1.6e-29 | 102.3 | 0.0012 | 18.0 | 5.0 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 7 | TPR_MLP1_2 | 812 | 935 | 1.6e-29 | 102.3 | 0.0066 | 97.0 | 2.7 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 8 | TPR_MLP1_2 | 912 | 1023 | 1.6e-29 | 102.3 | 0.0096 | 140.0 | 2.1 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 9 | TPR_MLP1_2 | 1014 | 1144 | 1.6e-29 | 102.3 | 1.7e-32 | 2.5e-28 | 98.4 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 10 | TPR_MLP1_2 | 1163 | 1298 | 1.6e-29 | 102.3 | 0.052 | 780.0 | -0.3 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 11 | TPR_MLP1_2 | 1271 | 1351 | 1.6e-29 | 102.3 | 8.2e-05 | 1.2 | 8.8 |
| pfu_aug2.0_1190.1_01462.t1 | 12 | 12 | TPR_MLP1_2 | 1366 | 1469 | 1.6e-29 | 102.3 | 0.0084 | 120.0 | 2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1190.1_01462.t1 | gi|524876723|ref|XP_005095072.1| | PREDICTED: nucleoprotein TPR-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1190.1_01462.t1 | gi|704182049|ref|XP_010135775.1| | PREDICTED: nucleoprotein TPR, partial [Buceros rhinoceros silvestris] | 0.0 |
| pfu_aug2.0_1190.1_01462.t1 | gi|723122318|ref|XP_010286936.1| | PREDICTED: nucleoprotein TPR, partial [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_1190.1_01462.t1 | gi|530594335|ref|XP_005290753.1| | PREDICTED: nucleoprotein TPR [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1190.1_01462.t1 | gi|719752502|ref|XP_010213469.1| | PREDICTED: nucleoprotein TPR isoform X1 [Tinamus guttatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1190.1_01462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1190.1_01462.t1 atggacgttggcctttcctgtcatttatttagtaaggtaagacaacaagtagtggtttatgtgacatatgaaaagaggaa aataaattcctcaaagcaaaacaccttcctgttagcgacaatcgattaacaacagtatttagaagtagacagtaaattac aggccatcacaagtaaattggaatcaaaaacagctcaatttgaggaattacagactgatcattctaagctagttgaaaca tttaaaagttgtgaaggaaaattaaaatcctaccaggaggcagaggagtccaatcttgccaggaagcttgcgaaagataa tgagctactggagtcagaaaagagagatctaacactgctggtagagaagaaaaataaagaaatagaaaacttaaatgatg aatggaagcgacttacagagcaagtgtctaaatctgagaatgccaaagtggaagcacaggttaaactgtcggaagtacag agccagtttgtatctgtggagagccaaaatagaatgctacaacagaatgtagatcagattcagaagcagctggattggtt aaacaaagatctcagtaccaaaaccaaagaactgtataacacaagacaggaacagtcgtcaaaacttttggacatccaaa gccagttacagctgaaaacagaggaagtgtcgcaccttcagaatacggtagaaacacttaccaatacaaacaaggaacaa gcaaagaagatcgagaactacatcaaaaagctggaagatgctaaatacatgcagattcagtctgaggagcagtatagaca ggaactggatggtaggaaaagattaggagagctttataagacctcggccacggaggcagagaacaaagtagatgaactga cacgagctgttgaggaactaaggaagctattaaaggatgcatctacagcttacacagatttggaagaggaaaagaaaact gctgaagagcagctaaaaatagaaataagtcagaaagaaacagcaatacagaaactgaaccaagagttggtgaatgctaa tgacctaatccaggaagctaggagcagaggtgcctcagcagaacaagtagaatctcttttccctacagctgctgctacaa gcaaattactgaaatctggaatgactctaactcagatttataatgagtatgtccaggcatctgaggctcttctactagag aaggaagaaaatcaacgactgaatcaggaccttaatgacattattgctgaaattgaagagaaggcaccaatactaaggaa acaaaaagaagattatgagaatgcagtacatagtgtggaacagctgtcaaaacagctagatgctgcaatgctcgactgtc agaactaccgtacagaagcagatcagacaacaagaaagtacaatatgatgcagagagaaaatcatcgactacaacaacag acagtggatctttctaaacaggttcagtacttggtaaaggaaatagaacaggtgagaggaggtagagtgatcaataagag ggagatttcctccagtgatgtcactagctcctcccatgttatcacagaagatcttgtcacttttgggagtatagaggaac ttcatgaacagaataaagctcttctacaaacaatacggcaactaaacgaaaagaagaaagaagacgagaccttagccaca gaatcacgaacaaaggaactgaaggaccagttagacagatcacttaaggaggtacaggagcttagatctgccagagaaag acaggctgacctggtaaaaggtctggtgaatcagagagacatgtaccgtgtattgctacaacaaaaaggagaggaggtaa ttgaaaccctacacacaccgaagaggcagtcacttggtaatgtatccatagagagtcctgggatggaacagtcagtagag gagaaagctaaagctctacaacaactacaggaagactttgacagctataaaacagagatgaaggaaaatcaaaaaatgtt gaatgatcaaataggcaagctccagaaccaagtatctgacatgagggtccaaaacatgcagctatcttctcagctggact tttccggagagaggtacaaagttctacagagcaatgctgataattacaggaaggagataggagcactgagagagaaggag aagaaattgtccacttctatagccaaacatgagcaaactataaacacactcagacaagacttacttaaggtacaggagaa tgcagctcgtgctgaggctcagtgccagaatctgaaagtagaaaaggaattgatgagatcagcagaacaaaggatgatat gtgaattggagaatgcacgtaaaactcaggcttctcagagtatggtgatggctaatctacagtcaatacagaacagctta gagagatctgagtttgacactaagacacggtacactaaccagatagagaagttagagatggagatcaaatcattacaacg taaaattgagaaagaagaaggggagagggaggcccttaaaacatgctatgagagtcaaataaagaatatgcgtcgtcaga atgaggccgaacagaagagtcatcagatagacagatccaatcttacatcggcacacaaagaaatagagagcttgagggct cagaccacagcattggagatgaagttagctgatgcttcaaaacagaaagtatcagacccacttgtcagatcagattccag tatgtatgttgacaaagaagaagtaaagaaccttaaaactgagctagaagattccagacgggaagtccacaatttgacag agcagcttactcagtgtagacaacataaacaggaatatatggagctagccaacaacttacagggggcaatagataacgag gcggaaatgacgaagaacgcacaggccagactacaggccgcggaggaggaccaagactcgatgagatcaagtatgcagat actggagaaacataaacaacaaatacaggaggaaaataagaaagaaagcgaggaaaatcacaaaatgattgctgacctga gaagagaacgatctaagattcaaggagaattacaggaggcaattcagaatctgtctgaggccaactcacaggcgtcagca gcacgtgaagattgtagtcggcagtctcagctagcagcagaggcacaggataaataccagagagaacttatgcttcatgc cgcagatgtagaggccttgacaacagtcaagaaacagttagaagagtttaatactaaattttcaatggaacaagagacac ggcagaaggcagaaagttctctgtcagagtgcaaggaatcttgggaagagcaggaaaagatttataaacaggagatagag aaactggaaattagatgtcaggatctcaataaacagaacaatatagtccacgatcaaatggaaaagatgagtagagaggt gatgtccatccagcaggcagttactagacaagatattngaattagattcctgagaagagagaaggagatagctgagtcta gattagaggttatacaagcagagtcaaacacattcaaacagagatatgagcgtatagagaaagagctccaagaagttaca aagactctaacagaggaacaggtcaaagcacaggttatgtatgaggttaaaaagttggagtcagacataaatcctcttca gttaaaaataagagacattacggctcagagagacgctatcatagacgagagggatactcttaaaggggaagtacagagat ggaagagtcgcaccaatcatcttatagagcaggccaataaaacagacccagaggaacataaaaaactacagcaagaaaag gagagaatatccaaagaactgaaatctgcaaatgaagagattcaaaaactgaaagcagaaatcagcagattgaatacaaa tgtacacagtgctcaaaatgaaactagccaggtcagacaacaagtgacaacactgaacaaaaccattgagacatgtggta aggagttggaggagaccaaacaacagctagagagtgccaaggagactaaggaagacccggcacaaaatacagctgtgata gaacgacacacggcaccaatcagggaagagctggaggctgcagagaaagagagagaccaagccaaacaacaactggaaaa acaaacagaggagtggaataaaacaaaggaacaagtcacacagctagaacagaatatcagcaacttaagtgcagaaattt tgaaactgaagggagaaaaagaggattacgagaagaaacaaaatcagtcacgatctgtactacaggctgcaaagaaaaaa atagcatcacaaacagaagaaaacgaaaaactaactaaagaaaagacagaacttaatgagagattgaattcaagcacaca gcaaatcaatgcacctataatcatgaaacttgccagaagtgtttcatatgaatcaaggatgacccctncattaataagca agctattcttcctacagctgaggcagctagaaagtcagtcctcccagacaaagccagtagctccccaaccccagggccct agtgtacgaccctcaacggctgtccccagtagatag |
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Protein
| Protein ID | pfu_aug2.0_1190.1_01462.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1190.1_01462.t1 MDVGLSCHLFSKVRQQVVVYVTYEKRKINSSKQNTFLLATIDXQQYLEVDSKLQAITSKLESKTAQFEELQTDHSKLVET FKSCEGKLKSYQEAEESNLARKLAKDNELLESEKRDLTLLVEKKNKEIENLNDEWKRLTEQVSKSENAKVEAQVKLSEVQ SQFVSVESQNRMLQQNVDQIQKQLDWLNKDLSTKTKELYNTRQEQSSKLLDIQSQLQLKTEEVSHLQNTVETLTNTNKEQ AKKIENYIKKLEDAKYMQIQSEEQYRQELDGRKRLGELYKTSATEAENKVDELTRAVEELRKLLKDASTAYTDLEEEKKT AEEQLKIEISQKETAIQKLNQELVNANDLIQEARSRGASAEQVESLFPTAAATSKLLKSGMTLTQIYNEYVQASEALLLE KEENQRLNQDLNDIIAEIEEKAPILRKQKEDYENAVHSVEQLSKQLDAAMLDCQNYRTEADQTTRKYNMMQRENHRLQQQ TVDLSKQVQYLVKEIEQVRGGRVINKREISSSDVTSSSHVITEDLVTFGSIEELHEQNKALLQTIRQLNEKKKEDETLAT ESRTKELKDQLDRSLKEVQELRSARERQADLVKGLVNQRDMYRVLLQQKGEEVIETLHTPKRQSLGNVSIESPGMEQSVE EKAKALQQLQEDFDSYKTEMKENQKMLNDQIGKLQNQVSDMRVQNMQLSSQLDFSGERYKVLQSNADNYRKEIGALREKE KKLSTSIAKHEQTINTLRQDLLKVQENAARAEAQCQNLKVEKELMRSAEQRMICELENARKTQASQSMVMANLQSIQNSL ERSEFDTKTRYTNQIEKLEMEIKSLQRKIEKEEGEREALKTCYESQIKNMRRQNEAEQKSHQIDRSNLTSAHKEIESLRA QTTALEMKLADASKQKVSDPLVRSDSSMYVDKEEVKNLKTELEDSRREVHNLTEQLTQCRQHKQEYMELANNLQGAIDNE AEMTKNAQARLQAAEEDQDSMRSSMQILEKHKQQIQEENKKESEENHKMIADLRRERSKIQGELQEAIQNLSEANSQASA AREDCSRQSQLAAEAQDKYQRELMLHAADVEALTTVKKQLEEFNTKFSMEQETRQKAESSLSECKESWEEQEKIYKQEIE KLEIRCQDLNKQNNIVHDQMEKMSREVMSIQQAVTRQDIXIRFLRREKEIAESRLEVIQAESNTFKQRYERIEKELQEVT KTLTEEQVKAQVMYEVKKLESDINPLQLKIRDITAQRDAIIDERDTLKGEVQRWKSRTNHLIEQANKTDPEEHKKLQQEK ERISKELKSANEEIQKLKAEISRLNTNVHSAQNETSQVRQQVTTLNKTIETCGKELEETKQQLESAKETKEDPAQNTAVI ERHTAPIREELEAAEKERDQAKQQLEKQTEEWNKTKEQVTQLEQNISNLSAEILKLKGEKEDYEKKQNQSRSVLQAAKKK IASQTEENEKLTKEKTELNERLNSSTQQINAPIIMKLARSVSYESRMTPXLISKLFFLQLRQLESQSSQTKPVAPQPQGP SVRPSTAVPSR |
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