Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_11905.1_19763
Locus scaffold11905.1 : 1 ... 4412 : -
To GenomeBrowser scaffold11905.1:1..4412
Genes list of scaffold scaffold11905.1
Synonym pfu_aug1.0_5767.1_31036

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_11905.1_19763.t1 gi|676478677|ref|XP_009061505.1| hypothetical protein LOTGIDRAFT_127179, partial [Lottia gigantea] 3.0e-21
pfu_aug2.0_11905.1_19763.t1 gi|641665640|ref|XP_008183456.1| PREDICTED: probable G-protein coupled receptor CG31760 [Acyrthosiphon pisum] 3.0e-21
pfu_aug2.0_11905.1_19763.t1 gi|260834741|ref|XP_002612368.1| hypothetical protein BRAFLDRAFT_221918 [Branchiostoma floridae] 1.0e-20
pfu_aug2.0_11905.1_19763.t1 gi|156398857|ref|XP_001638404.1| predicted protein [Nematostella vectensis] 1.0e-19
pfu_aug2.0_11905.1_19763.t1 gi|242016520|ref|XP_002428835.1| predicted protein [Pediculus humanus corporis] 4.0e-19

Transcript
Transcript IDpfu_aug2.0_11905.1_19763.t1
Definition-
>pfu_aug2.0_11905.1_19763.t1
tgcgttttcactgccggtcttggattcactagaggcgcatataactgccattgtcaaaatggctactaccacccctccac
gactcaccaatacttcctgggaatgacggtagagaatcactacgccaatcggtccctggaggacgggatgttccaatgtc
ttaggtgtgcgcctgggtgtacgacttgcgtcgatagctcgccttgtctgtttgaaacaaatgtggtgttacgatctatt
ttactcattatggccattctgacgcttgttggaattgtgctgacgtcagtgatgacgtattactacagagagacaaag

Protein
Protein IDpfu_aug2.0_11905.1_19763.t1
Definition-
>pfu_aug2.0_11905.1_19763.t1
CVFTAGLGFTRGAYNCHCQNGYYHPSTTHQYFLGMTVENHYANRSLEDGMFQCLRCAPGCTTCVDSSPCLFETNVVLRSI
LLIMAILTLVGIVLTSVMTYYYRETK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495