Gene
| Gene Model ID | pfu_aug2.0_11950.1_03108 |
|---|---|
| Locus | scaffold11950.1 : 1 ... 3415 : - |
| To GenomeBrowser | scaffold11950.1:1..3415 |
| Genes list of scaffold | scaffold11950.1 |
| Synonym | pfu_aug1.0_1784.1_08117 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11950.1_03108.t1 | 3 | 1 | EF-hand_7 | 44 | 103 | 6.2e-22 | 77.5 | 4.6e-16 | 6.9e-13 | 48.5 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 1 | EF-hand_1 | 47 | 70 | 1.5e-23 | 80.2 | 3.5e-06 | 0.0052 | 16.0 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 1 | EF-hand_5 | 47 | 66 | 3.6e-17 | 60.8 | 0.0039 | 5.8 | 6.4 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 1 | EF-hand_6 | 48 | 70 | 3.2e-20 | 70.1 | 6.2e-06 | 0.0092 | 15.7 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 1 | EF-hand_8 | 48 | 70 | 5.8e-13 | 48.2 | 0.0074 | 11.0 | 5.7 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 2 | EF-hand_8 | 60 | 103 | 5.8e-13 | 48.2 | 1.1e-12 | 1.6e-09 | 37.2 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 2 | EF-hand_1 | 80 | 105 | 1.5e-23 | 80.2 | 3.4e-11 | 5.0e-08 | 31.6 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 2 | EF-hand_6 | 80 | 105 | 3.2e-20 | 70.1 | 5.6e-09 | 8.3e-06 | 25.2 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 2 | EF-hand_5 | 81 | 100 | 3.6e-17 | 60.8 | 1.0e-08 | 1.5e-05 | 24.0 |
| pfu_aug2.0_11950.1_03108.t1 | 3 | 2 | EF-hand_7 | 111 | 140 | 6.2e-22 | 77.5 | 1.3e-06 | 0.002 | 18.2 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 3 | EF-hand_1 | 116 | 139 | 1.5e-23 | 80.2 | 8.0e-07 | 0.0012 | 18.0 |
| pfu_aug2.0_11950.1_03108.t1 | 3 | 3 | EF-hand_7 | 117 | 185 | 6.2e-22 | 77.5 | 4.5e-09 | 6.7e-06 | 26.1 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 3 | EF-hand_6 | 117 | 140 | 3.2e-20 | 70.1 | 4.6e-07 | 0.00068 | 19.3 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 3 | EF-hand_5 | 117 | 139 | 3.6e-17 | 60.8 | 5.7e-07 | 0.00085 | 18.5 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 3 | EF-hand_8 | 120 | 136 | 5.8e-13 | 48.2 | 0.039 | 58.0 | 3.4 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 4 | EF-hand_6 | 159 | 186 | 3.2e-20 | 70.1 | 0.0003 | 0.45 | 10.5 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 4 | EF-hand_1 | 171 | 186 | 1.5e-23 | 80.2 | 5.1e-05 | 0.076 | 12.3 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 4 | EF-hand_5 | 171 | 181 | 3.6e-17 | 60.8 | 0.00074 | 1.1 | 8.7 |
| pfu_aug2.0_11950.1_03108.t1 | 4 | 4 | EF-hand_8 | 171 | 185 | 5.8e-13 | 48.2 | 0.00097 | 1.4 | 8.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11950.1_03108.t1 | gi|597772698|ref|XP_007250104.1| | PREDICTED: calcyphosin-like protein-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_11950.1_03108.t1 | gi|705686515|ref|XP_010120657.1| | PREDICTED: calcyphosin-like protein [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_11950.1_03108.t1 | gi|696995251|ref|XP_009564398.1| | PREDICTED: calcyphosin-like protein [Cuculus canorus] | 0.0 |
| pfu_aug2.0_11950.1_03108.t1 | gi|699633379|ref|XP_009892985.1| | PREDICTED: calcyphosin-like protein [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_11950.1_03108.t1 | gi|700402008|ref|XP_009941941.1| | PREDICTED: calcyphosin-like protein [Opisthocomus hoazin] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11950.1_03108.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11950.1_03108.t1 atggcgttctttggagacgacgatgagcagaacagacaggcttttcaccagagaatggaatcaacatccaatcctataga gaaactgagatatgcatgtctggaaaggggagctagtggcatcaaagggctgggcaggagtttccgtataatggatgatg acggaagtaagaatttaagttacgaggaactcaggaacggactccgagattacggactacgtttggatgataatacagtc caggagctgttccgggaactggataaggacggaagcggaaaacttagctacgatgaatttctagtcgccatcaggggacc aataaacgatcgtaggagggcggtagttgagaaagcttttgccaagatggacgccacaggtgacggtgtgataaccatag aggacatacgtcagctatatgacgtcagccagcatccaaaatatcagagtggagagtggtcagctgaccagtgcttcaga aaattcttagacagctttgattctccgaatgacaaggacggaaaggtgacaacagaggaatttgtaaactactacaccgg tgtaagtgcttctatcgactcagatgattactttgagaaaatgatgatcagagcttggaggctgtag |
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Protein
| Protein ID | pfu_aug2.0_11950.1_03108.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11950.1_03108.t1 MAFFGDDDEQNRQAFHQRMESTSNPIEKLRYACLERGASGIKGLGRSFRIMDDDGSKNLSYEELRNGLRDYGLRLDDNTV QELFRELDKDGSGKLSYDEFLVAIRGPINDRRRAVVEKAFAKMDATGDGVITIEDIRQLYDVSQHPKYQSGEWSADQCFR KFLDSFDSPNDKDGKVTTEEFVNYYTGVSASIDSDDYFEKMMIRAWRL |
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