Gene
| Gene Model ID | pfu_aug2.0_12.1_06719 |
|---|---|
| Locus | scaffold12.1 : 59437 ... 63875 : - |
| To GenomeBrowser | scaffold12.1:59437..63875 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_8887.1_02664 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06719.t1 | 1 | 1 | C1q | 108 | 234 | 3.4e-22 | 78.8 | 2.2e-25 | 4.7e-22 | 78.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06719.t1 | gi|548454403|ref|XP_005676376.1| | PREDICTED: complement C1q-like protein 2 [Capra hircus] | 2.0e-11 |
| pfu_aug2.0_12.1_06719.t1 | gi|591309612|ref|XP_007081394.1| | PREDICTED: complement C1q-like protein 3 [Panthera tigris altaica] | 2.0e-11 |
| pfu_aug2.0_12.1_06719.t1 | gi|584050071|ref|XP_006769746.1| | PREDICTED: complement C1q-like protein 2, partial [Myotis davidii] | 4.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06719.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06719.t1 atggcgattgttggtgcatttgttcttatcttgttattacatgtattagattcattcaccgaaggaacaagggaatttaa cgatattgaaagacgcatcgaacaattggaagaaaaacatgacacagaaattgcgaacctcaagaaatcccttcaagaag agagaatttttaacagaaagcttgccgatagatgcacacgtttagaagaagaaatcaaaagtgccagatatggagaaacc gacctagacaaaatagaagcaatacataagcgacttctgcttaacgacaaaacgacttctgtatcacaggcaacaaaagt ggcgttctacgtaagacttatgacgaataatattgcagttggggagcgcgaaacagtcaaattcaacacagttataacca acattggaaatggatatgacgtaaataacggaatctttttttgtccaatcagtggcatttatttattcgccgcatcaatt gcatcacaacccgggtccgataagaatcttgatgcagagatcgtgcaccaagggaacgcagtcgctcatctacacgcaac cattcatggaattgacatgtcgtcgcaagttgtagttctacattgtcaacaaggggagaaagtgtggatacgacatgttg aaggggcgggagactcaaagacctttacaggcgattacagcggattcacgggagtattaatttcctcgctttaa |
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Protein
| Protein ID | pfu_aug2.0_12.1_06719.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06719.t1 MAIVGAFVLILLLHVLDSFTEGTREFNDIERRIEQLEEKHDTEIANLKKSLQEERIFNRKLADRCTRLEEEIKSARYGET DLDKIEAIHKRLLLNDKTTSVSQATKVAFYVRLMTNNIAVGERETVKFNTVITNIGNGYDVNNGIFFCPISGIYLFAASI ASQPGSDKNLDAEIVHQGNAVAHLHATIHGIDMSSQVVVLHCQQGEKVWIRHVEGAGDSKTFTGDYSGFTGVLISSL |
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