Gene
| Gene Model ID | pfu_aug2.0_12.1_06725 |
|---|---|
| Locus | scaffold12.1 : 258885 ... 279569 : + |
| To GenomeBrowser | scaffold12.1:258885..279569 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_2134.1_66206 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06725.t1 | 1 | 1 | AMP-binding | 50 | 445 | 0.0 | 188.1 | 0.0 | 0.0 | 187.5 |
| pfu_aug2.0_12.1_06725.t1 | 1 | 1 | PP-binding | 567 | 615 | 7.3e-06 | 26.1 | 5.2e-09 | 1.5e-05 | 25.1 |
| pfu_aug2.0_12.1_06725.t1 | 4 | 1 | PQQ_2 | 773 | 916 | 4.0e-24 | 85.3 | 1.9e-15 | 5.5e-12 | 45.6 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 1 | PQQ_3 | 775 | 818 | 6.9e-32 | 108.7 | 5.1e-05 | 0.15 | 12.3 |
| pfu_aug2.0_12.1_06725.t1 | 6 | 1 | PQQ | 775 | 791 | 1.4e-24 | 84.2 | 0.022 | 64.0 | 3.3 |
| pfu_aug2.0_12.1_06725.t1 | 6 | 2 | PQQ | 810 | 834 | 1.4e-24 | 84.2 | 0.0043 | 13.0 | 5.5 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 2 | PQQ_3 | 821 | 859 | 6.9e-32 | 108.7 | 1.8e-07 | 0.00055 | 20.1 |
| pfu_aug2.0_12.1_06725.t1 | 6 | 3 | PQQ | 844 | 876 | 1.4e-24 | 84.2 | 3.0e-09 | 8.9e-06 | 24.9 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 3 | PQQ_3 | 861 | 902 | 6.9e-32 | 108.7 | 2.6e-08 | 7.7e-05 | 22.8 |
| pfu_aug2.0_12.1_06725.t1 | 6 | 4 | PQQ | 885 | 921 | 1.4e-24 | 84.2 | 2.5e-07 | 0.00074 | 18.9 |
| pfu_aug2.0_12.1_06725.t1 | 4 | 2 | PQQ_2 | 903 | 962 | 4.0e-24 | 85.3 | 4.7e-07 | 0.0014 | 18.1 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 4 | PQQ_3 | 904 | 937 | 6.9e-32 | 108.7 | 4.5e-05 | 0.13 | 12.5 |
| pfu_aug2.0_12.1_06725.t1 | 6 | 5 | PQQ | 929 | 960 | 1.4e-24 | 84.2 | 3.7e-08 | 0.00011 | 21.5 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 5 | PQQ_3 | 943 | 1025 | 6.9e-32 | 108.7 | 0.0001 | 0.31 | 11.3 |
| pfu_aug2.0_12.1_06725.t1 | 4 | 3 | PQQ_2 | 1011 | 1046 | 4.0e-24 | 85.3 | 0.00056 | 1.7 | 8.0 |
| pfu_aug2.0_12.1_06725.t1 | 6 | 6 | PQQ | 1027 | 1045 | 1.4e-24 | 84.2 | 0.13 | 380.0 | 0.9 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 6 | PQQ_3 | 1029 | 1045 | 6.9e-32 | 108.7 | 0.4 | 1200.0 | -0.1 |
| pfu_aug2.0_12.1_06725.t1 | 4 | 4 | PQQ_2 | 1108 | 1163 | 4.0e-24 | 85.3 | 4.6e-06 | 0.014 | 14.9 |
| pfu_aug2.0_12.1_06725.t1 | 7 | 7 | PQQ_3 | 1133 | 1162 | 6.9e-32 | 108.7 | 1.3e-06 | 0.004 | 17.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06725.t1 | gi|744573533|ref|XP_010981369.1| | PREDICTED: acyl-CoA synthetase family member 4 isoform X2 [Camelus dromedarius] | 0.0 |
| pfu_aug2.0_12.1_06725.t1 | gi|585723296|ref|XP_006813617.1| | PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member 4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_12.1_06725.t1 | gi|675649430|ref|XP_008991561.1| | PREDICTED: acyl-CoA synthetase family member 4 isoform X2 [Callithrix jacchus] | 0.0 |
| pfu_aug2.0_12.1_06725.t1 | gi|73975041|ref|XP_539278.2| | PREDICTED: acyl-CoA synthetase family member 4 isoformX1 [Canis lupus familiaris] | 0.0 |
| pfu_aug2.0_12.1_06725.t1 | gi|544433134|ref|XP_005555295.1| | PREDICTED: acyl-CoA synthetase family member 4 isoform X6 [Macaca fascicularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06725.t1 atgtcttctcatctgctccacttggtgcctggctttaatcctaaccactgtaagaatatacaacaggacaacacagctgt tgtctatgatgatagtaaacagagatctgtaataacctacagtcagctgatctctatgtcttttgaggacagcacagctg ttgtctatgatgatagtaaacggagatctgttataatctacagtcagctgatctctatgtctactgagataaagaagaag atagagagtgtgtgtgggagatgtgaagtggtgggtatatgtatcccagatagtctacatgtgataccagtcatattagg ggtactatcagcagggtgtatattctataactttgatcccctggggcagggcttcgtgagacatgtcatcagtaatgttg gagtaggattgctgattgtcagtagaagttttctgaagtctgtagagaaactattgtcagattatgatgaggtgtgttta gacccagacagcacatcccgtatgtcaactgatgtcatatttatgaaactccggagtgttcccacaaagtcacatgaccc agacttagcatactgtatcacgacgtcaggcactacaggtgtgcccaaggttgttatggtaacacatagctgcattgtac ccaatatacagcatctacagaaaatctattccacagctgagagggatattgtatttatgagctcacccttgacctttgac cccagtattgtggagatatttgtgactttgacctctggagcatgccttgtaatgacctcaaacagagtaaagcagtcacc agccaagcttctagagatactgatcagtaataaggtctctatcatacaggctactccatccctgataaccaggctgagcc cccggaacctttccctgtctatactgggtccacacagcagtcttagggtcctggccctggggggtgaggatttccctccc ctcccagtcataaggagctggaggtcagagcagaatacaacaaagtttatcaatctttatgggataacggaggtgtcttg ctgggctatgtatcatgtattgtcacctgaggacctgagcattggtgatgagagtgttcctttgggtcaaccacttcaag acacagaggtcaaagtcaaagatcaccatggtaaccctatactctctgggataggagaactttacattggtggatctaag aggttttgtcaggtagatggtattgatgggaggaatgatgatacagacaaattataccccacgggtgatatcgtagaggt tacggaggatagccatatactatacaggggacgtaaagactcacaggtcaaacggaacggaatgaggataaatctacaac agattgatcatgttttgctgaaatctggtcttgtgtcatggtgcaaagcagtattccacaataacaaattattcctattc taccagaatgatgaagttaccaaatccagacatatacttgatgactctgtagatgataagttagatctccaacgttccat agtcactgtgatgagggaaactctaccatcacattactggcctgatgtagttaagatacttgatgttataccaataacta atcatggtaaaattggtatgactgtattaaaacagatgattgatgaatatgacggagaagatgaattaagtgatgaaaac aatattgtagatatcaggaaaatactgatgaaacatttacaaattgacaaaataagtgacgatatgaatttcctagaagt tggtggaaattctatattagctgtacaggtcctctcagagatagaacgtttactaaatcaacaggtccctgaactactgg agataatacttgataaatctgtaaaggacgtagaagacatggtacaaaaattactgatcactcagaccacggtaaacaat cctaaaatagatcataaaaatcatcactcagaaaaatcagacagggctggaataactgaagacactagtaaatatgagga gcataaaggaatgaatgataaatacgaaggagtaacatcaagaagcttgcctaacgagacttcacatacaaagaagagga aactggacatccatgaaatatcacataaaaatgacagccgaaaaatgaaactcggtgcacaccaaaatatcatgttatat ggtttatgttctataaggagaggaaaccattttcaaatgatcaatgaaaaagttattcataatagaatggatagatctag tatgaaagattgtcggagatgtatatgtgaaatgacagtagacaatacccaggagacatccagtgtatataacctacaac taaaggagttatggagatatgatacaggaaagtgtgtagatgcctcaccactgattgttaaactcagtgatggacaggca gctgtttatatgggatcacattctcatagattttgtgctgtttccatggaaaatggttgtttattatgggagacaactct tggtgacagagtagagtcgtcggcctgtctgagtgcgtgtggacgatatgttatagtaggttgctatgacggagctgtgt atttcctgtccatcaacactggagagatatactggaaattccaaacagagagggaagttaaatgttcacctactgttgat ccaataaccaacttggtcatcattggttcacatgataaacatctatatggacttaatactgagacagatggagaaattct gtggcagtacagtacagagaagcctgtattttcctcccctgtttacaccccagtaggaccatgtgtaggatgtgtggatg gacacatctatcaactcaatcatacaggcaaactggtttggaaattttctacaagtggaccaatattctcctcccctaca atgttccggcagcataaagacaatgatggtataaacagagaatcaggacaaaggtctgcagaccacgttgtaatgttacc aggtgatacagacagctctaaacaggtgcttgtggaagatcctaaatatagaacccactcatcatgtgactacagaatac ttataggatcacatgaccgtcatgtgtattgtatcagccatgatggctctcttctgtggaaattaaaactcaattccttt gtctactccactccctttggattcacacctacttttacgaagggtgaagagcataaaccattaaataaaagttctatgaa ttccaaacactgtcgggaaggtaatgttgtagatcaaccacaagatctgtcagtgataaacaaggctgaagaggaggagt gtcacaagatatcgttatgtagtgactgtagtagggtatgtgacacatgtgtattagcgtctagtacaggaagtctacac ctcgttaacacagcatcaggtgacctggagtgttgctataccctgccaggggaggtcttctcgtcaccagtcgtgtacgg tgaccgtattgttgtgggatgtagggatagtttcatctattgtcttcaatatgaaagagtaaaggatctttag |
|
Protein
| Protein ID | pfu_aug2.0_12.1_06725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06725.t1 MSSHLLHLVPGFNPNHCKNIQQDNTAVVYDDSKQRSVITYSQLISMSFEDSTAVVYDDSKRRSVIIYSQLISMSTEIKKK IESVCGRCEVVGICIPDSLHVIPVILGVLSAGCIFYNFDPLGQGFVRHVISNVGVGLLIVSRSFLKSVEKLLSDYDEVCL DPDSTSRMSTDVIFMKLRSVPTKSHDPDLAYCITTSGTTGVPKVVMVTHSCIVPNIQHLQKIYSTAERDIVFMSSPLTFD PSIVEIFVTLTSGACLVMTSNRVKQSPAKLLEILISNKVSIIQATPSLITRLSPRNLSLSILGPHSSLRVLALGGEDFPP LPVIRSWRSEQNTTKFINLYGITEVSCWAMYHVLSPEDLSIGDESVPLGQPLQDTEVKVKDHHGNPILSGIGELYIGGSK RFCQVDGIDGRNDDTDKLYPTGDIVEVTEDSHILYRGRKDSQVKRNGMRINLQQIDHVLLKSGLVSWCKAVFHNNKLFLF YQNDEVTKSRHILDDSVDDKLDLQRSIVTVMRETLPSHYWPDVVKILDVIPITNHGKIGMTVLKQMIDEYDGEDELSDEN NIVDIRKILMKHLQIDKISDDMNFLEVGGNSILAVQVLSEIERLLNQQVPELLEIILDKSVKDVEDMVQKLLITQTTVNN PKIDHKNHHSEKSDRAGITEDTSKYEEHKGMNDKYEGVTSRSLPNETSHTKKRKLDIHEISHKNDSRKMKLGAHQNIMLY GLCSIRRGNHFQMINEKVIHNRMDRSSMKDCRRCICEMTVDNTQETSSVYNLQLKELWRYDTGKCVDASPLIVKLSDGQA AVYMGSHSHRFCAVSMENGCLLWETTLGDRVESSACLSACGRYVIVGCYDGAVYFLSINTGEIYWKFQTEREVKCSPTVD PITNLVIIGSHDKHLYGLNTETDGEILWQYSTEKPVFSSPVYTPVGPCVGCVDGHIYQLNHTGKLVWKFSTSGPIFSSPT MFRQHKDNDGINRESGQRSADHVVMLPGDTDSSKQVLVEDPKYRTHSSCDYRILIGSHDRHVYCISHDGSLLWKLKLNSF VYSTPFGFTPTFTKGEEHKPLNKSSMNSKHCREGNVVDQPQDLSVINKAEEEECHKISLCSDCSRVCDTCVLASSTGSLH LVNTASGDLECCYTLPGEVFSSPVVYGDRIVVGCRDSFIYCLQYERVKDL |
|