Gene
| Gene Model ID | pfu_aug2.0_12.1_06727 |
|---|---|
| Locus | scaffold12.1 : 290900 ... 300106 : + |
| To GenomeBrowser | scaffold12.1:290900..300106 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_6361.1_31175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06727.t1 | 2 | 1 | DUF4606 | 324 | 337 | 1.7e-18 | 66.5 | 2.0 | 15000.0 | -4.1 |
| pfu_aug2.0_12.1_06727.t1 | 2 | 2 | DUF4606 | 370 | 468 | 1.7e-18 | 66.5 | 2.3e-22 | 1.7e-18 | 66.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06727.t1 | gi|390364015|ref|XP_003730502.1| | 2.0e-14 | |
| pfu_aug2.0_12.1_06727.t1 | gi|260815511|ref|XP_002602516.1| | hypothetical protein BRAFLDRAFT_93823 [Branchiostoma floridae] | 2.0e-12 |
| pfu_aug2.0_12.1_06727.t1 | gi|156408361|ref|XP_001641825.1| | predicted protein [Nematostella vectensis] | 3.0e-09 |
| pfu_aug2.0_12.1_06727.t1 | gi|742198080|ref|XP_010892627.1| | PREDICTED: rho guanine nucleotide exchange factor 9 [Esox lucius] | 2.0e-08 |
| pfu_aug2.0_12.1_06727.t1 | gi|676446910|ref|XP_009051234.1| | hypothetical protein LOTGIDRAFT_174395 [Lottia gigantea] | 4.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06727.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06727.t1 atgcatctatctcaccagcagccaccttcaaagttcagtaaatctctggatattcccaaatttggtcgtcccacacggag tcccaggacaccgtctacatctctacagtcttatagtgatacctttgaagaatcatcacagaaactacataattactctg acactttcatcagcgagtctgaagacattagtcatggaaaagatacaaaacaaagtgccactgtcattgatactgctagg acagacagaaggaatcagagtaggtctgtacgtctttatgatgaagttactgaagttcccacagagaggattgatactgt gatctcaggttatattgaaacagagcatcctaggactgttactgttggtatagagacttgtatttctgagctggaaacag accagttccgcaccgtcacagagagactagaatctcatggatccgatacagaaaggataaattcctctccctcacatctc tactcatactcagatacattccaatcaacgttgcagtccaaagatagatcgtatggagataaatactcacagtcaggaga tgaggaaaccagatctgagtatactgacagccatactgttgactactcccggacatcagcctctgggacacttactgacc acaccagcccagcaatgacatttgaggagtataccttatcatcagaggtttcagaaaaagattatgtgtacagttcagaa tttgaggaggattcacagagatatgactacagttcagagtttgaggctacagacagccaagattctgaaaaattattaca acaacaacttgaggaagacgaacgacagcggacaaaggaagctgaagagaactttgtgtcacacctaatatctgtagtac gacaaaaaccattcagggaaatggacattgaggaattgatagacagagaaatagaggatataccagaggaagaagacctc cctccacagaaagttcatttcttaaagaaaaaacttcatttgttaaagaaaaagaaaaggaaaggtgatcctactccaga accagagattaaccaatgggagacacagaaagagcagagaattactgattacggccttcatccagcgatcatggagaaat taaaactgaaaaatttcataatggccatggaaaaggcagcaaaggaagattttcatgatcctaaaaagtgcagagaatgc agggaccatgagagtgctattgacacagcggcagctgagaggaattttataaggataaaaacccgagataccagacagag ggtgatggaagaccattatcataaacatctagtcaaaatggattccatcaatctgatagcagacatagctcgatccttac ctcgacacactgacgatccccaggacatagaggatcaactgttcaaaggattaaatctctcgaagtctgtgacacaaaac agggtcaatggtaatggttaa |
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Protein
| Protein ID | pfu_aug2.0_12.1_06727.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06727.t1 MHLSHQQPPSKFSKSLDIPKFGRPTRSPRTPSTSLQSYSDTFEESSQKLHNYSDTFISESEDISHGKDTKQSATVIDTAR TDRRNQSRSVRLYDEVTEVPTERIDTVISGYIETEHPRTVTVGIETCISELETDQFRTVTERLESHGSDTERINSSPSHL YSYSDTFQSTLQSKDRSYGDKYSQSGDEETRSEYTDSHTVDYSRTSASGTLTDHTSPAMTFEEYTLSSEVSEKDYVYSSE FEEDSQRYDYSSEFEATDSQDSEKLLQQQLEEDERQRTKEAEENFVSHLISVVRQKPFREMDIEELIDREIEDIPEEEDL PPQKVHFLKKKLHLLKKKKRKGDPTPEPEINQWETQKEQRITDYGLHPAIMEKLKLKNFIMAMEKAAKEDFHDPKKCREC RDHESAIDTAAAERNFIRIKTRDTRQRVMEDHYHKHLVKMDSINLIADIARSLPRHTDDPQDIEDQLFKGLNLSKSVTQN RVNGNG |
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