Gene
| Gene Model ID | pfu_aug2.0_12.1_06734 |
|---|---|
| Locus | scaffold12.1 : 405660 ... 411019 : + |
| To GenomeBrowser | scaffold12.1:405660..411019 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_8092.1_24334 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06734.t1 | 5 | 1 | LRR_6 | 174 | 196 | 1.1e-12 | 46.5 | 0.0019 | 2.0 | 8.7 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 1 | LRR_1 | 177 | 188 | 1.3e-07 | 30.6 | 0.78 | 820.0 | 0.7 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 1 | LRR_4 | 177 | 187 | 1.4e-06 | 27.7 | 0.56 | 590.0 | 0.2 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 1 | LRR_7 | 177 | 188 | 1.7e-06 | 27.2 | 0.88 | 930.0 | 0.9 |
| pfu_aug2.0_12.1_06734.t1 | 2 | 1 | LRR_8 | 177 | 241 | 3.0e-06 | 26.8 | 0.0034 | 3.6 | 7.3 |
| pfu_aug2.0_12.1_06734.t1 | 5 | 2 | LRR_6 | 205 | 224 | 1.1e-12 | 46.5 | 0.00069 | 0.73 | 10.0 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 2 | LRR_4 | 205 | 245 | 1.4e-06 | 27.7 | 0.0033 | 3.5 | 7.3 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 1 | EF-hand_1 | 232 | 243 | 7.9e-11 | 40.4 | 2.5 | 2600.0 | -1.9 |
| pfu_aug2.0_12.1_06734.t1 | 5 | 3 | LRR_6 | 233 | 251 | 1.1e-12 | 46.5 | 0.0018 | 1.9 | 8.8 |
| pfu_aug2.0_12.1_06734.t1 | 2 | 2 | LRR_8 | 233 | 299 | 3.0e-06 | 26.8 | 7.6e-08 | 8.1e-05 | 22.3 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 1 | EF-hand_6 | 234 | 243 | 5.2e-09 | 35.2 | 8.9 | 9400.0 | -3.0 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 2 | LRR_1 | 234 | 245 | 1.3e-07 | 30.6 | 0.0064 | 6.8 | 7.1 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 2 | LRR_7 | 234 | 245 | 1.7e-06 | 27.2 | 0.024 | 26.0 | 5.6 |
| pfu_aug2.0_12.1_06734.t1 | 2 | 1 | EF-hand_7 | 235 | 258 | 3.0e-11 | 43.3 | 0.81 | 850.0 | 0.1 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 1 | EF-hand_8 | 237 | 257 | 6.7e-06 | 25.6 | 5.1 | 5500.0 | -3.0 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 3 | LRR_7 | 259 | 272 | 1.7e-06 | 27.2 | 0.0044 | 4.6 | 7.8 |
| pfu_aug2.0_12.1_06734.t1 | 5 | 4 | LRR_6 | 260 | 278 | 1.1e-12 | 46.5 | 0.0066 | 7.0 | 7.0 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 3 | LRR_1 | 261 | 273 | 1.3e-07 | 30.6 | 0.0015 | 1.6 | 9.0 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 3 | LRR_4 | 261 | 299 | 1.4e-06 | 27.7 | 1.3e-05 | 0.014 | 14.9 |
| pfu_aug2.0_12.1_06734.t1 | 5 | 5 | LRR_6 | 288 | 307 | 1.1e-12 | 46.5 | 0.015 | 16.0 | 5.9 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 4 | LRR_1 | 289 | 300 | 1.3e-07 | 30.6 | 0.0072 | 7.6 | 6.9 |
| pfu_aug2.0_12.1_06734.t1 | 4 | 4 | LRR_7 | 289 | 299 | 1.7e-06 | 27.2 | 0.0085 | 9.0 | 7.0 |
| pfu_aug2.0_12.1_06734.t1 | 2 | 2 | EF-hand_7 | 381 | 438 | 3.0e-11 | 43.3 | 1.5e-13 | 1.6e-10 | 40.9 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 2 | EF-hand_1 | 381 | 407 | 7.9e-11 | 40.4 | 1.6e-08 | 1.7e-05 | 23.8 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 2 | EF-hand_6 | 381 | 406 | 5.2e-09 | 35.2 | 2.1e-07 | 0.00022 | 20.8 |
| pfu_aug2.0_12.1_06734.t1 | 2 | 1 | EF-hand_5 | 381 | 402 | 1.1e-07 | 30.8 | 1.6e-06 | 0.0017 | 17.6 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 2 | EF-hand_8 | 384 | 406 | 6.7e-06 | 25.6 | 9.3e-06 | 0.0098 | 15.4 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 3 | EF-hand_8 | 408 | 436 | 6.7e-06 | 25.6 | 9.2e-05 | 0.098 | 12.2 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 3 | EF-hand_1 | 419 | 438 | 7.9e-11 | 40.4 | 1.6e-06 | 0.0017 | 17.5 |
| pfu_aug2.0_12.1_06734.t1 | 2 | 2 | EF-hand_5 | 421 | 437 | 1.1e-07 | 30.8 | 2.3e-05 | 0.024 | 13.9 |
| pfu_aug2.0_12.1_06734.t1 | 3 | 3 | EF-hand_6 | 422 | 440 | 5.2e-09 | 35.2 | 0.00012 | 0.13 | 12.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06734.t1 | gi|524915438|ref|XP_005112518.1| | PREDICTED: uncharacterized protein C14orf166B homolog [Aplysia californica] | 1.0e-38 |
| pfu_aug2.0_12.1_06734.t1 | gi|390342621|ref|XP_787322.3| | 1.0e-36 | |
| pfu_aug2.0_12.1_06734.t1 | gi|657734106|ref|XP_008305573.1| | PREDICTED: leucine-rich repeat-containing protein 74 [Cynoglossus semilaevis] | 7.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06734.t1 atgagtgacttacaaagacggtcagcatctagcaaaagtcctctttttaagaagtcttccaggcccccaccatcacgtga tggaggcattcacaccaatcctacagttcttgccgccaaataccgtcactcgtccacgtcatccaccaaactccacatgc agaatcccaccaaggtggtccgacagaaacgtgtggagctcgacatacaagtccaaaaggagatggagaagatgaaggca gaggaggaggagcggaggaagagggaacagagagaggagatagagaggaggatgcagatcgaggacatagaggacgtaga ttatgatgaggatgactctccttttgaggatgaagtgctgtatgacttttgccagcgtctatacatggaggcgtgtaaag atctcaatatcactcccatcaacctggtcattaaacacttagccaccaataaattagccatcgttggcgtcgttctaggc aagaaagacgccaaggcgtgtgcaatagctcttttgagaaattcaacagtagaaacattggtacttgatggtaatcactt aggtggcgctggttgtaggtactttggggacgtcatttccgtcagtacatacctgacagacataaaaatagcggagaata accttggaagtgatggtgctaaagatatctgttatgcattgaagaataacaatgtcgtcagaagacttgatttgtctgga aatggatttacggaggaagatgcggagtatttcaaggaaatgttggacgaaaaccacgcattgagagagttatatttgag tcacaacaagttccaagagaaaggtggagaggtattcgctgatggtctagcaaataacgacttcctaagggtgctagatt tgagctggaatcatctcagaatgggaggtgctaaggcaataggcactgcacttcaagatagatgtgtaacggataaattc gagaacctgtatcatgaactgcagaagaaaagaagtccgtttaaggtaatatacggaatggtgtggcaaacggatcgcag gtccctgtcaagttacgatagggagaaagaggaggaggacttggcggaagaggatccgttaacagtgttgtttgagtacg ctagactccagaacttcaggttaatagacatgttcaaaaatctggacacggataacagcgggtctctggacaaacaagag tttattgatgggttggcgatggtgaacatccctatgacaaagaagggcgtggccagactgatcaacagaatggacgtgga taatgacggagagattgattttggagagctcataatcgctcaaaaacagcataaagaaaaactaaagaacattatgaaaa gtgacgtaccgtgggagaacacagacattgctagaatagataaactcctcagaaaagtcatctacaagaggttcctcatg aggaaattctga |
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Protein
| Protein ID | pfu_aug2.0_12.1_06734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06734.t1 MSDLQRRSASSKSPLFKKSSRPPPSRDGGIHTNPTVLAAKYRHSSTSSTKLHMQNPTKVVRQKRVELDIQVQKEMEKMKA EEEERRKREQREEIERRMQIEDIEDVDYDEDDSPFEDEVLYDFCQRLYMEACKDLNITPINLVIKHLATNKLAIVGVVLG KKDAKACAIALLRNSTVETLVLDGNHLGGAGCRYFGDVISVSTYLTDIKIAENNLGSDGAKDICYALKNNNVVRRLDLSG NGFTEEDAEYFKEMLDENHALRELYLSHNKFQEKGGEVFADGLANNDFLRVLDLSWNHLRMGGAKAIGTALQDRCVTDKF ENLYHELQKKRSPFKVIYGMVWQTDRRSLSSYDREKEEEDLAEEDPLTVLFEYARLQNFRLIDMFKNLDTDNSGSLDKQE FIDGLAMVNIPMTKKGVARLINRMDVDNDGEIDFGELIIAQKQHKEKLKNIMKSDVPWENTDIARIDKLLRKVIYKRFLM RKF |
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