Gene
| Gene Model ID | pfu_aug2.0_12.1_06738 |
|---|---|
| Locus | scaffold12.1 : 478207 ... 502880 : - |
| To GenomeBrowser | scaffold12.1:478207..502880 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_857.1_00520 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ap-1 complex subunit gamma- partial | GO:0005515 GO:0005794 GO:0015031 GO:0016192 GO:0016482 GO:0030117 GO:0044763 GO:0045954 GO:1902582 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06738.t1 | 3 | 1 | Adaptin_N | 76 | 410 | 0.0 | 344.9 | 0.0 | 0.0 | 232.0 |
| pfu_aug2.0_12.1_06738.t1 | 3 | 2 | Adaptin_N | 443 | 636 | 0.0 | 344.9 | 3.9e-36 | 6.4e-33 | 113.8 |
| pfu_aug2.0_12.1_06738.t1 | 1 | 1 | CENP-B_N | 664 | 715 | 2.5e-09 | 36.4 | 3.5e-12 | 5.8e-09 | 35.2 |
| pfu_aug2.0_12.1_06738.t1 | 1 | 1 | HTH_Tnp_Tc5 | 733 | 796 | 5.2e-15 | 54.9 | 7.2e-18 | 1.2e-14 | 53.8 |
| pfu_aug2.0_12.1_06738.t1 | 3 | 1 | DDE_1 | 826 | 899 | 7.10458e-43 | 146.2 | 2.5e-22 | 4.0e-19 | 68.6 |
| pfu_aug2.0_12.1_06738.t1 | 3 | 2 | DDE_1 | 897 | 996 | 7.10458e-43 | 146.2 | 1.9e-25 | 3.2e-22 | 78.7 |
| pfu_aug2.0_12.1_06738.t1 | 3 | 3 | Adaptin_N | 1113 | 1145 | 0.0 | 344.9 | 0.014 | 23.0 | 3.1 |
| pfu_aug2.0_12.1_06738.t1 | 1 | 1 | Alpha_adaptinC2 | 1221 | 1329 | 8.5e-28 | 96.9 | 1.5e-30 | 2.4e-27 | 95.5 |
| pfu_aug2.0_12.1_06738.t1 | 3 | 3 | DDE_1 | 1262 | 1295 | 7.10458e-43 | 146.2 | 3.1 | 5200.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06738.t1 | gi|694644478|ref|XP_009479865.1| | PREDICTED: AP-1 complex subunit gamma-1, partial [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_12.1_06738.t1 | gi|700425103|ref|XP_009950998.1| | PREDICTED: AP-1 complex subunit gamma-1, partial [Leptosomus discolor] | 0.0 |
| pfu_aug2.0_12.1_06738.t1 | gi|704498291|ref|XP_010077245.1| | PREDICTED: AP-1 complex subunit gamma-1, partial [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_12.1_06738.t1 | gi|733906681|ref|XP_010716416.1| | PREDICTED: AP-1 complex subunit gamma-1 isoform X2 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_12.1_06738.t1 | gi|733906683|ref|XP_010716417.1| | PREDICTED: AP-1 complex subunit gamma-1 isoform X3 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06738.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06738.t1 atggatttacttggtgatgtacatgtaggcgcaccgacaccgatgagtaacggtgatcagaccagtacgtcaggaggcac caatgatttactggatctgttaggagatgttccttcattatcaagtccaggtagtacaaatatgccgccccctgttaact tgatggacggattaggcgacagtccaccggcaccgaccatgaatggaattggtgctgcagatgagaaagcagtggtgcag aaaaagtgttcatccatccgtgaatgcatcagagataaagatggttacctttaccgtggcaagaatgtctccaagttgtt gtatattcatttacttggatatccaattcactttggactggtggagtgccttcagctgatagggagtgctcgaaatttct cagacaaacgagtaggatatctggcggccatgttgattttggatgaaactcaggacgtgcatttacttctcatctgctct atcatgtaagatctctgtaatgggactcagtacacccagggtctggctctgtgtaccatggcatctataaactcagctat atggttccaatacttgtccacggaagtttctaagatgatcaaatcttcagatgtctatatcaagaagaaggccattcttt gtgcgtgccgtatcatacgtaaagatgtaccagacatagacacaatggagatgttcattccagctacacagtccctcctc gatgagagaaatcacgattctgagtcacaaaatcatttgtccttaacagtttacttacaagtcgttccccagttagtcag aattcttaaaaatctgataatggctggttactcaccagagcatgatgtcgccggtattagtgatccattcctccaggtaa aaattttgaagttgctacgagtgctgggtaaaaacaacacggacagcagccaaattatgaatgatattttagcacaggtt gccatgaacacagacaccagtcagaatgtgggtcgtgccgtactgtacgagactgtacgaacaatactaggaattaaatc agaggcaggtctaagggttctggcagtgaatattctaggaagatttttaattaacaatgataatgacatcagatacgtag cgttgaacactttattacgtgcagtacatgcagattacaatgctgtacagagacatagaacgactattatggactgctta aaagatcctgatatatctatcagaaagcaacttttgatgggaattgtctttgaacttttattggtagtttctccagcact aatattagttatagagttagttcctgtcatacttcctgctcaaagtagacgtgcggaagagttgtcgtttaccttgatca acgcaaataatgtcagaggaatgatgaaggaactgctgtcattcttagaaaattgtgatccagaattcaaagccgactgt tgttctaatatagtccaagcagcagaatcgtatgctccagatagaaggtggcacatagacactataatgaaagtcttaat catagcgggtagcttagtaagggaggatgtagtgtccatactgatacagcttatagcggagacaaaccagctacacaatt acacggtacaacaactgtttaaacgtattgaggacgatgtatcccagcagcctctagtacaggtggcgtcatggtgtata ggggaatacggagaaaaacttgtatcagggacatgtgaagaggatgaacctatacaggtttctgaggatgaggtagtgga cgtgttagagaaagtcctgtccatgaattactgtgaagatttcaccaaagagtacgctatgaacgctctaatgaaactaa gctctcggtttaggacctccataggaagaatgacagaattacagaatcctgtaggcagcctaggtgagcaatccagtgaa ggacccaggtctcatcctgaggggataactggatcaccggcccctacagcgcagaagaagggtacgaagagaaagctgga tctaaagacttatgagacaaagtacgatgccatcatggaggttgagagggggtccttgtcgaagaaacaggtcgctgaaa agtttgccatatccgcttcaacgctctcaacatggcttaaaaacgctgactctattaaagagaaggttacgtctggtaat gttgagcctcaacgcaaagagaacagagcagccaagtttcctgaagtcgaggacgcactcttaaaatggtttgcaaatgc cagaacccataatgtgacagtctcaggggagatgatgcgagagaaggccagagacttcgcactcaaactgggagttccag actcagagttcgaatgttccgttggttggctagagcgatttaaagccaggcacgtcatagtttttaaaagggtatgtggc gaatcgaatgacgttgcgacagattcggtagcattgtcagactggaaaagtaagcttgccactatccttaaagactactc cgcatcagacgttttcaacgctgacgagacaggcatattctataaacttatgccagacaaaacgctagaattcaagtctg tcagttgccatggtggtaaacaaagcaaagagcaccttacagtaatggtggctgccaatatgtccggcacagagaagctt cccttaatggtcatcggcaagtctgcgaatcccagatgcttcaagaatatgtcaaagcagaaacgtaaaatctgcttggt tatcgacaactgccccgcgcatcctcacattaaaagtctgaaagctacgaccatagtattcctgccacccaacacaacca gcgttactcaaccaatggaccagggcatcatccgcaaccttaaagttttctacaggaagttcatggtacaacggaagctg agagccatagacaccaactccgacttcaccctgacggtactggacgcactcaggatgctacaccaagcctggcgttctgt gacgatgaagaccatagccaactgttacagacacgcaggatttgccgtaactgactccgaccaggtcgccgagtccaacg atgatgatgacgacgacgacccagacaatgatttaccactggcaagtctcatgaacgtccctccaggcgtctcaatgacg acaaagatatcatcgaggggatcgtcttccaccagaaatgacaacaacgacgagagtgacgatgaggaaccagcacaacc accaaccagaccaacaatctacagtgccctagatgcctttgacacccttaggtccttttttgacgcacacaacggcggag atcgagcgaaccaagccacagccgatctcaactccatgttggtcgatgcccacctgacgaagacgaggataaaagctgtg atagaaaaatacagcagtagtcgtaatgttgagattcagcaaagatctgtggaatttacttgtatattcaaaaaatatga taacttaaggccggtccttttagcacaaatgccattgatggagaacagccgatataaaaacgttttcacagacagtttag aaaatttatcgttaccagatctaatagatacagggcaacacaccaacatggaaaattccagcccattaactgagggtcaa cggagtataattgatctactcagggatgtaacatcaagttcaggttctttatcgttgatggcgctaaataagaacggttt attgattaactttgagtttgagagagaaaatggacagccaaatgtcaccataataaacgtcaaagctggaaactccacac cttctgttatgtcagattttgtctttcaagctgcagttcctagatcattacagttacggatgcaaccacagtcagggaca attctagctccgttaaatggcaactatataacacaggtcttaaaaatcaataacccactgaagcatcctttacgactgag gataagagtgacgtacacacagaacggtaatagtataacagaggctggtgaggtcaactcattccccaacacactgtggc aatga |
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Protein
| Protein ID | pfu_aug2.0_12.1_06738.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06738.t1 MDLLGDVHVGAPTPMSNGDQTSTSGGTNDLLDLLGDVPSLSSPGSTNMPPPVNLMDGLGDSPPAPTMNGIGAADEKAVVQ KKCSSIRECIRDKDGYLYRGKNVSKLLYIHLLGYPIHFGLVECLQLIGSARNFSDKRVGYLAAMLILDETQDVHLLLICS IMXDLCNGTQYTQGLALCTMASINSAIWFQYLSTEVSKMIKSSDVYIKKKAILCACRIIRKDVPDIDTMEMFIPATQSLL DERNHDSESQNHLSLTVYLQVVPQLVRILKNLIMAGYSPEHDVAGISDPFLQVKILKLLRVLGKNNTDSSQIMNDILAQV AMNTDTSQNVGRAVLYETVRTILGIKSEAGLRVLAVNILGRFLINNDNDIRYVALNTLLRAVHADYNAVQRHRTTIMDCL KDPDISIRKQLLMGIVFELLLVVSPALILVIELVPVILPAQSRRAEELSFTLINANNVRGMMKELLSFLENCDPEFKADC CSNIVQAAESYAPDRRWHIDTIMKVLIIAGSLVREDVVSILIQLIAETNQLHNYTVQQLFKRIEDDVSQQPLVQVASWCI GEYGEKLVSGTCEEDEPIQVSEDEVVDVLEKVLSMNYCEDFTKEYAMNALMKLSSRFRTSIGRMTELQNPVGSLGEQSSE GPRSHPEGITGSPAPTAQKKGTKRKLDLKTYETKYDAIMEVERGSLSKKQVAEKFAISASTLSTWLKNADSIKEKVTSGN VEPQRKENRAAKFPEVEDALLKWFANARTHNVTVSGEMMREKARDFALKLGVPDSEFECSVGWLERFKARHVIVFKRVCG ESNDVATDSVALSDWKSKLATILKDYSASDVFNADETGIFYKLMPDKTLEFKSVSCHGGKQSKEHLTVMVAANMSGTEKL PLMVIGKSANPRCFKNMSKQKRKICLVIDNCPAHPHIKSLKATTIVFLPPNTTSVTQPMDQGIIRNLKVFYRKFMVQRKL RAIDTNSDFTLTVLDALRMLHQAWRSVTMKTIANCYRHAGFAVTDSDQVAESNDDDDDDDPDNDLPLASLMNVPPGVSMT TKISSRGSSSTRNDNNDESDDEEPAQPPTRPTIYSALDAFDTLRSFFDAHNGGDRANQATADLNSMLVDAHLTKTRIKAV IEKYSSSRNVEIQQRSVEFTCIFKKYDNLRPVLLAQMPLMENSRYKNVFTDSLENLSLPDLIDTGQHTNMENSSPLTEGQ RSIIDLLRDVTSSSGSLSLMALNKNGLLINFEFERENGQPNVTIINVKAGNSTPSVMSDFVFQAAVPRSLQLRMQPQSGT ILAPLNGNYITQVLKINNPLKHPLRLRIRVTYTQNGNSITEAGEVNSFPNTLWQ |
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