Gene
| Gene Model ID | pfu_aug2.0_12.1_06743 |
|---|---|
| Locus | scaffold12.1 : 592402 ... 609640 : - |
| To GenomeBrowser | scaffold12.1:592402..609640 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_14933.1_25355 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine aminotransferase | GO:0004838 GO:0009058 GO:0009074 GO:0030170 GO:0043648 GO:1901605 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06743.t1 | 1 | 1 | Aminotran_1_2 | 144 | 504 | 0.0 | 220.6 | 0.0 | 0.0 | 220.4 |
| pfu_aug2.0_12.1_06743.t1 | 1 | 1 | Aminotran_5 | 186 | 304 | 6.8e-07 | 28.3 | 4.9e-10 | 1.2e-06 | 27.5 |
| pfu_aug2.0_12.1_06743.t1 | 1 | 1 | Beta_elim_lyase | 206 | 319 | 4.7e-07 | 29.2 | 2.8e-10 | 7.0e-07 | 28.6 |
| pfu_aug2.0_12.1_06743.t1 | 1 | 1 | DegT_DnrJ_EryC1 | 207 | 319 | 2.4e-06 | 26.8 | 1.5e-09 | 3.8e-06 | 26.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06743.t1 | gi|676454512|ref|XP_009053704.1| | hypothetical protein LOTGIDRAFT_227234 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_12.1_06743.t1 | gi|260798602|ref|XP_002594289.1| | hypothetical protein BRAFLDRAFT_275580 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_12.1_06743.t1 | gi|584071063|ref|XP_006755851.1| | PREDICTED: tyrosine aminotransferase [Myotis davidii] | 0.0 |
| pfu_aug2.0_12.1_06743.t1 | gi|149411878|ref|XP_001509220.1| | PREDICTED: tyrosine aminotransferase [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_12.1_06743.t1 | gi|558135949|ref|XP_006091256.1| | PREDICTED: tyrosine aminotransferase [Myotis lucifugus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06743.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06743.t1 atgaactttgtatttagagattctcctggtggatttgtcaatgtaacatgttggggtagcgaggattatataagaaacct gtacatcaattttggcattggagatgtagtacagctcagcaacttcattgttcaacccaaaacaacagatgggaatgatg atagatttaaaccagcaactcctttagaagaggtcaaaggtgaaggtaacttgaaggtgacgaaacctaccttatacagc caaacaaacgaagagggaagaaggaatcagggaatcgtgagtttaaaatctaaaacattaagaatggagccaaaagctaa gagaatgagaaaggaatggcatgttccggcctcagaaatggcgaggaatacattcaacccaataaggagcattgtggacg gcatgaaactgaccccaaatccagagaaacaaatgattgcgctctctattggtgaccccacagttttccataacttgccg atccctgaggacctagaggatgtcgtaatccagaagataaaatcacgtaaattcaacggttataatccatctattggtta tgaagaatctcgccaatctgtggcagaatatacatccacagacactataaaatacacagctaaggacgtaatattgacat caggatgttctatggcccttgacctgtgtatatcagtactcgctaatagaggacagaatattttggtaccgagaccggga ttctctatctacaagacgctggccgagtcacaaggcatccatgtcaagtactacgatctcatgcctgagaggtcctggca ggtagacatagagagtttggagtctgcgattgacagtaatacagccgccgttatcataaacaatccgtccaatccctgtg gctcagtgttcagcagagatcatctattggatattctggatacagcctctcgtcataaactacccatcatctcagatgaa atttatgagcattttgtgttctcaggaaacaaatattattccttgggatcactcactactgacgtacctatactctcatg tagtggcttgactaaaaggtttctggtgccgggatggagaatggggtggattgtcatcacagataaaaatgatgtcatga cagaggtacgtaaaggactagtcagtctaacccagagactgctgggacctacgtcactcgtacaagcctctcttcctgag attttagcagaaactccacaaagcttctttacagatacgctgggttatgttgaggacaacgctaacttgttctacaaact gatatcagcgattcctggtctacgtccagtcaaacctcagggagccatgtatatgatgattggtattgacattgagaagt ttcccggtataacggatgatgttgacttcacagagaagcttgtaaaagaacaaagtgtcttttgtctacctgccaagtgc tttcaatacccaaattacttcagaattgttctaacgattcccaaagacaaagtagtggtggcgtgtgacaggatgagaga tttctgtaacgaccattacatgaccatggtcaatggtcacacctag |
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Protein
| Protein ID | pfu_aug2.0_12.1_06743.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06743.t1 MNFVFRDSPGGFVNVTCWGSEDYIRNLYINFGIGDVVQLSNFIVQPKTTDGNDDRFKPATPLEEVKGEGNLKVTKPTLYS QTNEEGRRNQGIVSLKSKTLRMEPKAKRMRKEWHVPASEMARNTFNPIRSIVDGMKLTPNPEKQMIALSIGDPTVFHNLP IPEDLEDVVIQKIKSRKFNGYNPSIGYEESRQSVAEYTSTDTIKYTAKDVILTSGCSMALDLCISVLANRGQNILVPRPG FSIYKTLAESQGIHVKYYDLMPERSWQVDIESLESAIDSNTAAVIINNPSNPCGSVFSRDHLLDILDTASRHKLPIISDE IYEHFVFSGNKYYSLGSLTTDVPILSCSGLTKRFLVPGWRMGWIVITDKNDVMTEVRKGLVSLTQRLLGPTSLVQASLPE ILAETPQSFFTDTLGYVEDNANLFYKLISAIPGLRPVKPQGAMYMMIGIDIEKFPGITDDVDFTEKLVKEQSVFCLPAKC FQYPNYFRIVLTIPKDKVVVACDRMRDFCNDHYMTMVNGHT |
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