Gene
| Gene Model ID | pfu_aug2.0_12.1_06744 |
|---|---|
| Locus | scaffold12.1 : 613321 ... 625008 : + |
| To GenomeBrowser | scaffold12.1:613321..625008 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_7120.1_09493 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06744.t1 | 2 | 1 | Njmu-R1 | 36 | 204 | 1.4013e-45 | 155.3 | 3.1e-23 | 2.3e-19 | 69.3 |
| pfu_aug2.0_12.1_06744.t1 | 2 | 2 | Njmu-R1 | 212 | 310 | 1.4013e-45 | 155.3 | 4.0e-28 | 3.0e-24 | 85.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06744.t1 | gi|625182406|ref|XP_007642512.1| | PREDICTED: protein Njmu-R1 isoform X1 [Cricetulus griseus] | 1.0e-33 |
| pfu_aug2.0_12.1_06744.t1 | gi|558171783|ref|XP_006125229.1| | PREDICTED: protein Njmu-R1 isoform X2 [Pelodiscus sinensis] | 8.0e-31 |
| pfu_aug2.0_12.1_06744.t1 | gi|617637489|ref|XP_007530896.1| | PREDICTED: protein Njmu-R1 [Erinaceus europaeus] | 4.0e-30 |
| pfu_aug2.0_12.1_06744.t1 | gi|701369368|ref|XP_009962809.1| | PREDICTED: protein Njmu-R1, partial [Tyto alba] | 5.0e-30 |
| pfu_aug2.0_12.1_06744.t1 | gi|699639990|ref|XP_009909845.1| | PREDICTED: protein Njmu-R1 [Picoides pubescens] | 5.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06744.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06744.t1 atgttagagaaaaccgggaaaacagggtgctctggagtttgtgaacaggatagtaatgtttactactatacagacacctg tgtaaattcactgtggcactcacagggtgcaaatgaaaatcaagtagaggatgataaagattcagaggccttcagtttat caatgctgatgacagaccttccattggaggcagaaaaagaactgaggctgtttttgtctatgaagttaactaagggttct gtatacagtgacactggctgtattgctcctatagaattcaaactaaacactagccgcagaaacggccaacgacacttgga tatttggttggtcagtgacgtggcttctgatatagctgacatccagtttgaagcacgcagcaacaaaaaatacattgttt gcttcatgtctccacatagcagtatactggaccattttcttcatgaactgaatttgtatgcagcagaattcacaactgtg ctgtcaatgaaggatgacaaagcatcagaacgttacctcagccattggccatatgagaccatggagtatttgtgtcgatg tttgtcattggttcaacaggatgtcaagtaccttctttactgtgctttggtagatggaaaactggcaatagaaggaggtt gcacaaagttttgtgaagactgggggaagctactacacacggcaaacataagggacccaggccagatcagacaaatcata gaagctggtaaagtcaagtatatacaaagtatcaatactctgaagagacttctcatgcaagcagagaatgattactatgc cttgtacagggcatatgtcttcctcaagaattctgggaatagtgaaatacttttacattgtgcacacttggacaaaatac ctgaagtgagcagtgtttttaaatcgttagaggaattcatgtacgagacaaaagttgtttcctga |
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Protein
| Protein ID | pfu_aug2.0_12.1_06744.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06744.t1 MLEKTGKTGCSGVCEQDSNVYYYTDTCVNSLWHSQGANENQVEDDKDSEAFSLSMLMTDLPLEAEKELRLFLSMKLTKGS VYSDTGCIAPIEFKLNTSRRNGQRHLDIWLVSDVASDIADIQFEARSNKKYIVCFMSPHSSILDHFLHELNLYAAEFTTV LSMKDDKASERYLSHWPYETMEYLCRCLSLVQQDVKYLLYCALVDGKLAIEGGCTKFCEDWGKLLHTANIRDPGQIRQII EAGKVKYIQSINTLKRLLMQAENDYYALYRAYVFLKNSGNSEILLHCAHLDKIPEVSSVFKSLEEFMYETKVVS |
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