Gene
| Gene Model ID | pfu_aug2.0_12.1_06745 |
|---|---|
| Locus | scaffold12.1 : 631475 ... 632956 : - |
| To GenomeBrowser | scaffold12.1:631475..632956 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_7120.1_09494 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor ap-1 isoform x1 | GO:0001932 GO:0002224 GO:0005515 GO:0006355 GO:0010604 GO:0010605 GO:0031324 GO:0031325 GO:0043565 GO:0048731 GO:0065009 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06745.t1 | 2 | 1 | bZIP_2 | 15 | 23 | 1.5e-06 | 27.8 | 1.7 | 3500.0 | -2.1 |
| pfu_aug2.0_12.1_06745.t1 | 2 | 1 | bZIP_1 | 16 | 28 | 8.6e-20 | 70.4 | 2.8 | 6000.0 | -2.8 |
| pfu_aug2.0_12.1_06745.t1 | 2 | 1 | bZIP_Maf | 21 | 29 | 5.5e-07 | 29.8 | 4.9 | 10000.0 | -3.2 |
| pfu_aug2.0_12.1_06745.t1 | 1 | 1 | Jun | 23 | 219 | 1.0e-37 | 130.1 | 7.20001e-41 | 1.5e-37 | 129.5 |
| pfu_aug2.0_12.1_06745.t1 | 2 | 2 | bZIP_Maf | 226 | 289 | 5.5e-07 | 29.8 | 2.6e-10 | 5.5e-07 | 29.8 |
| pfu_aug2.0_12.1_06745.t1 | 2 | 2 | bZIP_1 | 228 | 290 | 8.6e-20 | 70.4 | 4.1e-23 | 8.6e-20 | 70.4 |
| pfu_aug2.0_12.1_06745.t1 | 2 | 2 | bZIP_2 | 234 | 286 | 1.5e-06 | 27.8 | 7.2e-10 | 1.5e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06745.t1 | gi|529250140|ref|NP_001268726.1| | uncharacterized protein LOC101863323 [Aplysia californica] | 0.0 |
| pfu_aug2.0_12.1_06745.t1 | gi|260813364|ref|XP_002601388.1| | hypothetical protein BRAFLDRAFT_130399 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_12.1_06745.t1 | gi|82654945|sp|P18870.2|JUN_CHICK | Transcription factor AP-1 [Gallus gallus] | 0.0 |
| pfu_aug2.0_12.1_06745.t1 | gi|71896841|ref|NP_001026460.1| | transcription factor AP-1 [Gallus gallus] | 0.0 |
| pfu_aug2.0_12.1_06745.t1 | gi|700382754|ref|XP_009931287.1| | PREDICTED: transcription factor AP-1, partial [Opisthocomus hoazin] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06745.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06745.t1 atggaagcggtagatcggaccttctatccggacgaaccccaggatctgaaaattgaaaataaccaagtgaaccagttaaa acgtaaaatgacattggactttaactccggtggcaaaacaaaacagcagaaagtggctcaaatgttggcttcgcctgact tgaacatgcttaaattggcttcgcctgagttggagaaaatgatcatccaggctaacgggtttgttacgacgactccgacc cctacacagttcatatttccgaagtatgtgaccgaggagcaggagcagtacgcccgggggttcgtggaagcactagcaga aatccacggtaagcagcaagttttacccgtgccccagggcgcgattccaccccctcagcagaagcccgtggctctcacaa ggcctcgggatgactcctcggacgatgattctaactcgtcatttcatcactcaagcgatccagttgtttcactggcaact acaacaaccttaccggggggattggttactatcaacccagcagtttcgctctttcaaagtgcagcaatgaacagaacttt agcgcaaaactcactcacttctctcacaaacgtccgtacctctcaagtgaaagaagaaccacaaactgtaccgtgtgtga attccaatacccctcctctatcaccgattgatatggacaatcaagaaaaaattaaactggaacgtaaacgagcaaggaat agggtcgcagcgcgaaaatgtagaacgcgaaaattggaacgcattgcaagacttgaggaacgtgtcgcagaactgaaagg acaaaatagtgacttggcatctacagcaagtaacttgcgagatcaagtgtgcaaattaaagcagcaaataattgaacatg tcaacagtggatgtaacatcatgctttcaactaatattcaactgtgctga |
|
Protein
| Protein ID | pfu_aug2.0_12.1_06745.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06745.t1 MEAVDRTFYPDEPQDLKIENNQVNQLKRKMTLDFNSGGKTKQQKVAQMLASPDLNMLKLASPELEKMIIQANGFVTTTPT PTQFIFPKYVTEEQEQYARGFVEALAEIHGKQQVLPVPQGAIPPPQQKPVALTRPRDDSSDDDSNSSFHHSSDPVVSLAT TTTLPGGLVTINPAVSLFQSAAMNRTLAQNSLTSLTNVRTSQVKEEPQTVPCVNSNTPPLSPIDMDNQEKIKLERKRARN RVAARKCRTRKLERIARLEERVAELKGQNSDLASTASNLRDQVCKLKQQIIEHVNSGCNIMLSTNIQLC |
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