Gene
| Gene Model ID | pfu_aug2.0_12.1_06746 |
|---|---|
| Locus | scaffold12.1 : 640107 ... 664830 : + |
| To GenomeBrowser | scaffold12.1:640107..664830 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_7120.1_09495 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| muts protein homolog 5-like | GO:0000003 GO:0044763 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06746.t1 | 1 | 1 | MutS_III | 180 | 489 | 1.1e-36 | 126.5 | 8.20001e-40 | 2.4e-36 | 125.4 |
| pfu_aug2.0_12.1_06746.t1 | 2 | 1 | MutS_IV | 276 | 334 | 2.0e-06 | 27.9 | 2.1 | 6100.0 | -2.6 |
| pfu_aug2.0_12.1_06746.t1 | 2 | 2 | MutS_IV | 353 | 448 | 2.0e-06 | 27.9 | 1.8e-09 | 5.3e-06 | 26.5 |
| pfu_aug2.0_12.1_06746.t1 | 1 | 1 | MutS_V | 497 | 731 | 0.0 | 215.9 | 0.0 | 0.0 | 215.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06746.t1 | gi|676463692|ref|XP_009056678.1| | hypothetical protein LOTGIDRAFT_233005 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_12.1_06746.t1 | gi|156405605|ref|XP_001640822.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_12.1_06746.t1 | gi|524870253|ref|XP_005091912.1| | PREDICTED: mutS protein homolog 5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_12.1_06746.t1 | gi|677465837|gb|KFQ55251.1| | MutS protein 5, partial [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_12.1_06746.t1 | gi|591372289|ref|XP_007060849.1| | PREDICTED: mutS protein homolog 5-like [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06746.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06746.t1 atgagtttaatgtggcatggtgggaagctagggatagcctgctacaacgtggacacctctgtaatgtctctgatgttaga tgtactggaaactgactcattcactttcctgaaaagggtgttcagacaagtacagccagtttgtgttgttataagctcca agcaggatgaaagacttgtcagtgtactcaaatctatgttaaatactgaaagcatagtggatgcatcaaactcagatgga aatcagtttctgcagtttttaccaagtatagacttcagtttagacatatgtaagagaaggatattattccttgacttacc agctatgcccaaacattacaccgagtcggagaaaacaatctacttgtcatcattagtaccatttgaaaatgtcaatacaa taagagcagctggtggtttgttgaagtttctagagaagaacaggataggtgtagagttagaggaaagctccgtcagcgtg cctgttattgatattcagttcttctctctagatgaccagcttgtattggatgacacagccttcagtgcacttcagatatt tgagaaggaatcccatccatctgtgtataaagtgggacagggttcatcaaaagaaggtcttagtctttttgggataatga acagatgcaagtcacccactggatccaagttaatgagattgtggtttctgagacctttaagggacctcgatattctcaga cagaggcaggaggccatagctttctttgtggaacctagaaatattgaagctgtgtctaccttgaccaattgcctgaaaaa tatcaagaacatagcatatatcttaaagagaatgcagagagcacaggcaactgtaaatgattggcaagccttgtataaga cagcttaccatgccatgtacatccgggacatatgtcgtcaacagtctcagaaaatacacatcttccagaagataacatca acattcagtgaaagcctgtaccaagtggccacattgattaacagaatagttgatttagatgagagtataactcagtccag atttgttgtcaaatcaaatgtagattctactttagatgagaaaaagaggatctataatggtctaccagacctaatgacca cagtggctaatgaagaactaaacgagttgagtgaggatatcagggaatgtaatgtcatctatcttcctcagataggttac ctactggccataccattgacagagaccctcaagtctggatatgaaataccaggattggaattcaagtttattacaaacaa cgtcctgcattacaaaagtgcccgcacaatagagctggacactgtgttaggagaccatgaatgtgacatcaaggatcagg agatgggtatcatgaggaaactacagaataacgttctccagcatgccaagtccctgatggaagtgatagacctttgtgct gaattagactgcttgctatctctagcagcttgtgctcaggagaacaactatgtcagacctactttatctgaggaaaacat tataaagatagagggaggaagacatccaatacaggagatgtgctgcagcccttttgtacctaacagtactatgagctgtg aagaagagagtaaaataaaagtcctgactggtccgaatgcctgtggtaaaagcgtttacctcaaacaggtggcccttatt gtgtacatggcccacattgggagttacgtgccggctaagtctgctgtcatcgggtgtatcgatagaatttacactaggat tcgttctctggagagtgtctctgatggattgtcaacttttatgatagatgtgaatcaggttgcagaggctcttcgaaatg ccacctccaagtctttagttgtggtagatgagtttggtaaaggcacggaaatggttgatggtgtggctttactgtgctct agcctcatacactggataggacaagggacagcctgccctcatgtactggtctctactcacttccacagtataatacatca gcatttactgccccagtcacctctcatcaagtacatgacttttgagactttacatgaggatggagagttactgttcttgt atcagctgattgagggtcataccaactccagctacgcctgtcatattgctacgctggcgggtcagtccaaagagatagtt aggaggggaagtcaggtatctgagctcataaggcaaaataaacctgtggacagagcagactcaatagattctgatgcaca gattaaaaggaatcagctgattgtgaagaaatttttggagcttgacctggataaggacaacctacagtcatttctctcca actttgtgctgaaagtggacaccggtcaaatgtga |
|
Protein
| Protein ID | pfu_aug2.0_12.1_06746.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06746.t1 MSLMWHGGKLGIACYNVDTSVMSLMLDVLETDSFTFLKRVFRQVQPVCVVISSKQDERLVSVLKSMLNTESIVDASNSDG NQFLQFLPSIDFSLDICKRRILFLDLPAMPKHYTESEKTIYLSSLVPFENVNTIRAAGGLLKFLEKNRIGVELEESSVSV PVIDIQFFSLDDQLVLDDTAFSALQIFEKESHPSVYKVGQGSSKEGLSLFGIMNRCKSPTGSKLMRLWFLRPLRDLDILR QRQEAIAFFVEPRNIEAVSTLTNCLKNIKNIAYILKRMQRAQATVNDWQALYKTAYHAMYIRDICRQQSQKIHIFQKITS TFSESLYQVATLINRIVDLDESITQSRFVVKSNVDSTLDEKKRIYNGLPDLMTTVANEELNELSEDIRECNVIYLPQIGY LLAIPLTETLKSGYEIPGLEFKFITNNVLHYKSARTIELDTVLGDHECDIKDQEMGIMRKLQNNVLQHAKSLMEVIDLCA ELDCLLSLAACAQENNYVRPTLSEENIIKIEGGRHPIQEMCCSPFVPNSTMSCEEESKIKVLTGPNACGKSVYLKQVALI VYMAHIGSYVPAKSAVIGCIDRIYTRIRSLESVSDGLSTFMIDVNQVAEALRNATSKSLVVVDEFGKGTEMVDGVALLCS SLIHWIGQGTACPHVLVSTHFHSIIHQHLLPQSPLIKYMTFETLHEDGELLFLYQLIEGHTNSSYACHIATLAGQSKEIV RRGSQVSELIRQNKPVDRADSIDSDAQIKRNQLIVKKFLELDLDKDNLQSFLSNFVLKVDTGQM |
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