Gene
| Gene Model ID | pfu_aug2.0_12.1_06749 |
|---|---|
| Locus | scaffold12.1 : 832593 ... 839681 : - |
| To GenomeBrowser | scaffold12.1:832593..839681 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | pfu_aug1.0_4946.1_59664 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutathione peroxidase 7 | GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12.1_06749.t1 | 1 | 1 | GSHPx | 42 | 148 | 2.2e-34 | 117.0 | 5.8e-38 | 2.9e-34 | 116.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12.1_06749.t1 | gi|573894433|ref|XP_006634966.1| | PREDICTED: glutathione peroxidase 7-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_12.1_06749.t1 | gi|585156934|ref|XP_006730780.1| | PREDICTED: glutathione peroxidase 7 [Leptonychotes weddellii] | 0.0 |
| pfu_aug2.0_12.1_06749.t1 | gi|478528883|ref|XP_004438617.1| | PREDICTED: glutathione peroxidase 7 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_12.1_06749.t1 | gi|327271165|ref|XP_003220358.1| | PREDICTED: LOW QUALITY PROTEIN: glutathione peroxidase 7 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_12.1_06749.t1 | gi|557010696|ref|XP_006006032.1| | PREDICTED: glutathione peroxidase 7 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12.1_06749.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06749.t1 atgtcagtctatggttcaaagactaaaattgaaattgtttactttagtttcttggtaacgtcattggccaaaatactagt tttagcagaagcatctgacgaaagtgaaagtagaactagaagtttcttcgatttcgttgctgtagatatcgatgataaaa tactcagtttgagacaatacgagggaaaggttttgttggttgtgaacgtggcatctgaatgtggatatacagacggacat tacagatcgcttgtcaaccttcagaaccagttagaacctgattttactgttctagcctttccctgcaatcagtttgggaa tcaggaacctgggactcataaggaaatcaaagactttgcagaaaagacatatggagtaaatttcccaatgttttccaaaa taaatgtcataaatgacaatgtgccagacttttggacatttttaaatgatgaagctaaagcagtacctaactggaatttt tggaagtatctggttgacaagaaaggaaaggtggtgcacgcctgggggccatgggtgtctgtagagagtattacaccgta cataacagatctcataaagtatggcaaggttagaggattgactgatgaactctga |
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Protein
| Protein ID | pfu_aug2.0_12.1_06749.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12.1_06749.t1 MSVYGSKTKIEIVYFSFLVTSLAKILVLAEASDESESRTRSFFDFVAVDIDDKILSLRQYEGKVLLVVNVASECGYTDGH YRSLVNLQNQLEPDFTVLAFPCNQFGNQEPGTHKEIKDFAEKTYGVNFPMFSKINVINDNVPDFWTFLNDEAKAVPNWNF WKYLVDKKGKVVHAWGPWVSVESITPYITDLIKYGKVRGLTDEL |
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