Gene
| Gene Model ID | pfu_aug2.0_120.1_00267 |
|---|---|
| Locus | scaffold120.1 : 1319 ... 7523 : + |
| To GenomeBrowser | scaffold120.1:1319..7523 |
| Genes list of scaffold | scaffold120.1 |
| Synonym | pfu_aug1.0_6978.1_60167 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neurocalcin-delta b | GO:0003073 GO:0003779 GO:0005829 GO:0019722 GO:0030276 GO:0043014 GO:0046872 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_120.1_00267.t1 | 4 | 1 | EF-hand_8 | 8 | 23 | 1.1e-17 | 63.4 | 1.9 | 3100.0 | -2.2 |
| pfu_aug2.0_120.1_00267.t1 | 2 | 1 | EF-hand_7 | 43 | 87 | 1.9e-21 | 75.9 | 3.0e-07 | 0.00049 | 20.1 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 1 | EF-hand_1 | 44 | 55 | 2.3e-22 | 76.5 | 1.7 | 2800.0 | -2.0 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 1 | EF-hand_6 | 44 | 55 | 5.4e-19 | 66.3 | 4.6 | 7600.0 | -2.7 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 2 | EF-hand_8 | 44 | 90 | 1.1e-17 | 63.4 | 1.6e-08 | 2.7e-05 | 23.7 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 2 | EF-hand_1 | 67 | 90 | 2.3e-22 | 76.5 | 4.1e-09 | 6.8e-06 | 25.0 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 2 | EF-hand_6 | 67 | 91 | 5.4e-19 | 66.3 | 9.2e-08 | 0.00015 | 21.3 |
| pfu_aug2.0_120.1_00267.t1 | 3 | 1 | EF-hand_5 | 68 | 86 | 5.7e-17 | 60.2 | 5.6e-08 | 9.2e-05 | 21.6 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 3 | EF-hand_8 | 100 | 127 | 1.1e-17 | 63.4 | 5.0e-06 | 0.0083 | 15.7 |
| pfu_aug2.0_120.1_00267.t1 | 2 | 2 | EF-hand_7 | 101 | 171 | 1.9e-21 | 75.9 | 1.7e-17 | 2.8e-14 | 53.0 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 3 | EF-hand_1 | 102 | 128 | 2.3e-22 | 76.5 | 1.0e-10 | 1.7e-07 | 30.0 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 3 | EF-hand_6 | 105 | 127 | 5.4e-19 | 66.3 | 3.1e-07 | 0.00051 | 19.7 |
| pfu_aug2.0_120.1_00267.t1 | 3 | 2 | EF-hand_5 | 105 | 125 | 5.7e-17 | 60.2 | 1.2e-06 | 0.0021 | 17.3 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 4 | EF-hand_1 | 150 | 172 | 2.3e-22 | 76.5 | 4.1e-08 | 6.8e-05 | 21.8 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 4 | EF-hand_6 | 150 | 174 | 5.4e-19 | 66.3 | 1.1e-07 | 0.00018 | 21.1 |
| pfu_aug2.0_120.1_00267.t1 | 3 | 3 | EF-hand_5 | 150 | 171 | 5.7e-17 | 60.2 | 1.3e-07 | 0.00021 | 20.4 |
| pfu_aug2.0_120.1_00267.t1 | 4 | 4 | EF-hand_8 | 152 | 172 | 1.1e-17 | 63.4 | 3.8e-07 | 0.00062 | 19.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_120.1_00267.t1 | gi|498977992|ref|XP_004549221.1| | PREDICTED: neurocalcin-delta B [Maylandia zebra] | 0.0 |
| pfu_aug2.0_120.1_00267.t1 | gi|734627748|ref|XP_010742074.1| | PREDICTED: neurocalcin-delta B [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_120.1_00267.t1 | gi|26329629|dbj|BAC28553.1| | unnamed protein product [Mus musculus] | 0.0 |
| pfu_aug2.0_120.1_00267.t1 | gi|348513235|ref|XP_003444148.1| | PREDICTED: neurocalcin-delta B-like isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_120.1_00267.t1 | gi|657530765|ref|XP_008299050.1| | PREDICTED: neurocalcin-delta B [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_120.1_00267.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00267.t1 atgggtaacaagcctccgaaaaagctatcaccaacagagatcagggacctccaaaaggaggtggactttactggtgaaga aatcaacgactggtacaaagagtatatgagaagctgtagacacgggaaatacctcacagtgaaggaattctcagaagtgt actcaagtacattcggtggggacgccggggcgtttgcaaatcacgtttttcgaacttttgattctgacggagatggtaaa gtagacttcagagaatttctggtgggactgagtgttacagctagctcaaatctggaaaagaaactgagatgggcttttaa aatgtacgatatcgatggaaatgggcgcatctcaaaggatgaaatgttgtcattaatgacggccgtgtataaaatgacac cacagattaagaaaccatcagatgtaagtacacctgagaagatgacgaaaaaattgtttaaaaaactcgatacagacaaa aacggagaacttagctgggaggagttttatgagggagcgaggagagatcagctggtggtagccatgctggaactaaatca ctttgagataagaaaagcaggaccctctcactcagagacattaaattcgacaattataatatatagccttgatcatgacg cagattatttttttgtgcgcctttttatttggcgcatcaagtgcagctttggtggagctggactcttacactacacaaga gcccatccacaacagccagcgcccagcggaaacaaggttgagcaagtgttctctaccgttttcttaccggccgtcaaaac aggtaaccttctgaagttcctggctgatactgctggtcaggaggtcgttgtcaagctgttcggcaagaacattgagaagc taggtaaagccctggggagcacggcccaacaggctgggggtctattgttgggaggagctaaagatctggtgggaagcgtc ggtgatgccttcaaagatctaggcggtaagctaacgtctctgacatcagatattggtcatggattggataactttgcatc gagtgtgtcgaacttcggtcatggattcgaacactctcttcagaacattgggaattctttgaccaatggagccactgatg ccgccaatgctatagctcacactgcagaaaacgttggaaagcagatttcacatggtgtggaaaatattggtcactcaata ggacatgcaatcggacatatatttggaagacgttctgtatgtcctaactgtgacaaaatcgaaggcaaaagctctcagca aatcattgatggaatttgtggatcagattacatgactaaacagaacggggtaatcacagagatcaaccacatgcagaaca tctactctgcttctgtcaacactaccattattcacaaagtcgagtatgatcccacctccattgatacctcccagggtgtc caattcactaaagtcttcatcacctacaccgtggacgggaaacccatccgtttcagctctggtgctcacctaagactgac cgatctacctacaatgtcagaaagtctgtccatggaaatctacgaagcctacgtctaa |
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Protein
| Protein ID | pfu_aug2.0_120.1_00267.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00267.t1 MGNKPPKKLSPTEIRDLQKEVDFTGEEINDWYKEYMRSCRHGKYLTVKEFSEVYSSTFGGDAGAFANHVFRTFDSDGDGK VDFREFLVGLSVTASSNLEKKLRWAFKMYDIDGNGRISKDEMLSLMTAVYKMTPQIKKPSDVSTPEKMTKKLFKKLDTDK NGELSWEEFYEGARRDQLVVAMLELNHFEIRKAGPSHSETLNSTIIIYSLDHDADYFFVRLFIWRIKCSFGGAGLLHYTR AHPQQPAPSGNKVEQVFSTVFLPAVKTGNLLKFLADTAGQEVVVKLFGKNIEKLGKALGSTAQQAGGLLLGGAKDLVGSV GDAFKDLGGKLTSLTSDIGHGLDNFASSVSNFGHGFEHSLQNIGNSLTNGATDAANAIAHTAENVGKQISHGVENIGHSI GHAIGHIFGRRSVCPNCDKIEGKSSQQIIDGICGSDYMTKQNGVITEINHMQNIYSASVNTTIIHKVEYDPTSIDTSQGV QFTKVFITYTVDGKPIRFSSGAHLRLTDLPTMSESLSMEIYEAYV |
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