Gene
| Gene Model ID | pfu_aug2.0_120.1_00268 |
|---|---|
| Locus | scaffold120.1 : 46796 ... 56563 : + |
| To GenomeBrowser | scaffold120.1:46796..56563 |
| Genes list of scaffold | scaffold120.1 |
| Synonym | pfu_aug1.0_11534.1_53712 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| voltage-dependent anion channel 2 | GO:0000166 GO:0005741 GO:0005886 GO:0008308 GO:0015288 GO:0031101 GO:0042803 GO:0044070 GO:0046930 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_120.1_00268.t2 | 1 | 1 | Porin_3 | 2 | 275 | 0.0 | 258.6 | 0.0 | 0.0 | 258.4 |
Transcript
| Transcript ID | pfu_aug2.0_120.1_00268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00268.t1 atgactgatgaagaattatgtttgaaggtgcaaaccatggccccaccaacatactcagatcttggaaaggcagctagaga tttattcagcaaaggatacaactttggttcattcaagttagatgctaaaacaaaaacagacagcggtgtagaattcaatg tgagtggaggccagagcacagacagtgggaaggtgaatggtaaactagagaccaagtacaagtgctcagattatggttta actttcaaggaagaatggaatacagataacatattgaagacagagattgctattgaggaccaatttgtgaatggtcttaa actagaattcaacacatcatttgctccacagactggcaagaagagtggaaagatcaagacgtcgtacaagatggattatg taaatctgggatgtgatttagactttgactttgctggaccaacagtacatggagcagctgtgttaggatacaatggctgg ttaggaggataccaaatgtcgtatgatacgtccaaatcaaagctcaccaaaaacaactttgcatttggatatgaggcagg agacttcacaattcacacaaatgttaacgatggctcagaatttgctgggtcagtataccataaagtaaacaaagacttgg aagctggtgtcaatctgtcctggtcatcaggtaacaactccaccatgctcggtctcggtgccaagtataagctcgataag gattcatctcttgtagcaaaggttaataatagcagtcagataggacttggatacaccaccaaactgagggatggcgtgaa gcttacagtgtcatccctggtagagggcaagaatctgaactctggaggacacaaagtcggactcggcgtggagttcgagg cgtag |
|
| Transcript ID | pfu_aug2.0_120.1_00268.t2 |
| Definition | - |
>pfu_aug2.0_120.1_00268.t2 atggccccaccaacatactcagatcttggaaaggcagctagagatttattcagcaaaggatacaactttggttcattcaa gttagatgctaaaacaaaaacagacagcggtgtagaattcaatgtgagtggaggccagagcacagacagtgggaaggtga atggtaaactagagaccaagtacaagtgctcagattatggtttaactttcaaggaagaatggaatacagataacatattg aagacagagattgctattgaggaccaatttgtgaatggtcttaaactagaattcaacacatcatttgctccacagactgg caagaagagtggaaagatcaagacgtcgtacaagatggattatgtaaatctgggatgtgatttagactttgactttgctg gaccaacagtacatggagcagctgtgttaggatacaatggctggttaggaggataccaaatgtcgtatgatacgtccaaa tcaaagctcaccaaaaacaactttgcatttggatatgaggcaggagacttcacaattcacacaaatgttaacgatggctc agaatttgctgggtcagtataccataaagtaaacaaagacttggaagctggtgtcaatctgtcctggtcatcaggtaaca actccaccatgctcggtctcggtgccaagtataagctcgataaggattcatctcttgtagcaaaggttaataatagcagt cagataggacttggatacaccaccaaactgagggatggcgtgaagcttacagtgtcatccctggtagagggcaagaatct gaactctggaggacacaaagtcggactcggcgtggagttcgaggcgtag |
|
Protein
| Protein ID | pfu_aug2.0_120.1_00268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00268.t1 MTDEELCLKVQTMAPPTYSDLGKAARDLFSKGYNFGSFKLDAKTKTDSGVEFNVSGGQSTDSGKVNGKLETKYKCSDYGL TFKEEWNTDNILKTEIAIEDQFVNGLKLEFNTSFAPQTGKKSGKIKTSYKMDYVNLGCDLDFDFAGPTVHGAAVLGYNGW LGGYQMSYDTSKSKLTKNNFAFGYEAGDFTIHTNVNDGSEFAGSVYHKVNKDLEAGVNLSWSSGNNSTMLGLGAKYKLDK DSSLVAKVNNSSQIGLGYTTKLRDGVKLTVSSLVEGKNLNSGGHKVGLGVEFEA |
|
| Protein ID | pfu_aug2.0_120.1_00268.t2 |
| Definition | - |
>pfu_aug2.0_120.1_00268.t2 MAPPTYSDLGKAARDLFSKGYNFGSFKLDAKTKTDSGVEFNVSGGQSTDSGKVNGKLETKYKCSDYGLTFKEEWNTDNIL KTEIAIEDQFVNGLKLEFNTSFAPQTGKKSGKIKTSYKMDYVNLGCDLDFDFAGPTVHGAAVLGYNGWLGGYQMSYDTSK SKLTKNNFAFGYEAGDFTIHTNVNDGSEFAGSVYHKVNKDLEAGVNLSWSSGNNSTMLGLGAKYKLDKDSSLVAKVNNSS QIGLGYTTKLRDGVKLTVSSLVEGKNLNSGGHKVGLGVEFEA |
|