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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_120.1_00270
Locus scaffold120.1 : 66907 ... 70535 : -
To GenomeBrowser scaffold120.1:66907..70535
Genes list of scaffold scaffold120.1
Synonym pfu_aug1.0_5020.1_67136

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_120.1_00270.t1 gi|658883664|ref|XP_008424645.1| PREDICTED: F-box only protein 40 [Poecilia reticulata] 1.0e-15
pfu_aug2.0_120.1_00270.t1 gi|617455112|ref|XP_007569996.1| PREDICTED: F-box only protein 40 [Poecilia formosa] 5.0e-15
pfu_aug2.0_120.1_00270.t1 gi|41055929|ref|NP_957445.1| F-box only protein 30 [Danio rerio] 2.0e-14
pfu_aug2.0_120.1_00270.t1 gi|551490762|ref|XP_005796953.1| PREDICTED: F-box only protein 40-like [Xiphophorus maculatus] 3.0e-14
pfu_aug2.0_120.1_00270.t1 gi|736235188|ref|XP_010783448.1| PREDICTED: F-box only protein 40 [Notothenia coriiceps] 5.0e-14

Transcript
Transcript IDpfu_aug2.0_120.1_00270.t1
Definition-
>pfu_aug2.0_120.1_00270.t1
atgcctttagttgacatcgacgcctacaacaaggactacgtgagtccccttatagagaacctgtcacccccgggacatgt
acactgctccacgtgtaggaacctgaggtgtccagttcccgtggactgtgaaatgatcccttgtaaagagggatgtcctg
tcatgttccactcctgtaaggaggaagaccatctcaaaatctgccggagagccgagatcacatgccccatagggtgtgga
caaaccataaccaggaaaaaatttgctcagcatttcacgatgtgtacaaagaacgatcgttacgtagaatacgtagagag
gaatgacgtcagaccgtgtgttaatggctgtaataaacggatcaaagcaagtgcccagaaagaccatgatctactatgta
agctcaagagagtaccctgtattaatgctccagcgggctgtgaagctctgttgttacgtaaagagaaagcatcgcatttg
ccccgatgtccagcggccgtcaatagtcttatacgaccggatattgtccggagggacgagtttacaaactttacaaaaat
gcgtgctacgttggaggacgctggcagtaaggaatgctatatgtgtcattcagacttcaccttgccaggcgtggaacccg
tgatcccatctggatcaatgaaacatgacagcaccctggactgcccggtgtttgtaccaagtctacctcagtgtgacgac
agactgaccagcgaccagaatatacaggacctgcctggtgaactactactgaccatatgtggtcatctggacagtcttag
cctttactttctgtccatgacgtgtaggaggctcagggacatatgccagtctctactacaggagcgcggaatggtcagtc
tacgatggaaggacgtgcaggaggggacagaaaagacgtggacaccacaggataaggtttggacatttagcaaaatgaca
actcctgtgatacaatggaagcgctatgaccccgagctttacctacgtcatgtgaccagctgtgaggtgaataaatcagt
agagagggttgttaacaaggaaccttttgcgcttgtccccatggacagcaataaagacatatccacttcatcataa

Protein
Protein IDpfu_aug2.0_120.1_00270.t1
Definition-
>pfu_aug2.0_120.1_00270.t1
MPLVDIDAYNKDYVSPLIENLSPPGHVHCSTCRNLRCPVPVDCEMIPCKEGCPVMFHSCKEEDHLKICRRAEITCPIGCG
QTITRKKFAQHFTMCTKNDRYVEYVERNDVRPCVNGCNKRIKASAQKDHDLLCKLKRVPCINAPAGCEALLLRKEKASHL
PRCPAAVNSLIRPDIVRRDEFTNFTKMRATLEDAGSKECYMCHSDFTLPGVEPVIPSGSMKHDSTLDCPVFVPSLPQCDD
RLTSDQNIQDLPGELLLTICGHLDSLSLYFLSMTCRRLRDICQSLLQERGMVSLRWKDVQEGTEKTWTPQDKVWTFSKMT
TPVIQWKRYDPELYLRHVTSCEVNKSVERVVNKEPFALVPMDSNKDISTSS

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