Gene
| Gene Model ID | pfu_aug2.0_120.1_00274 |
|---|---|
| Locus | scaffold120.1 : 264917 ... 283356 : + |
| To GenomeBrowser | scaffold120.1:264917..283356 |
| Genes list of scaffold | scaffold120.1 |
| Synonym | pfu_aug1.0_10237.1_24700 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_120.1_00274.t1 | 2 | 1 | TMEM154 | 32 | 122 | 6.0e-08 | 32.5 | 2.9e-05 | 0.027 | 14.1 |
| pfu_aug2.0_120.1_00274.t1 | 2 | 1 | DUF4366 | 45 | 129 | 7.0e-10 | 38.6 | 1.5e-06 | 0.0014 | 18.1 |
| pfu_aug2.0_120.1_00274.t1 | 2 | 2 | TMEM154 | 203 | 296 | 6.0e-08 | 32.5 | 8.3e-06 | 0.0077 | 15.9 |
| pfu_aug2.0_120.1_00274.t1 | 2 | 2 | DUF4366 | 218 | 303 | 7.0e-10 | 38.6 | 9.4e-07 | 0.00087 | 18.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_120.1_00274.t1 | gi|676453230|ref|XP_009053288.1| | hypothetical protein LOTGIDRAFT_160162 [Lottia gigantea] | 3.0e-16 |
| pfu_aug2.0_120.1_00274.t1 | gi|676475973|ref|XP_009060641.1| | hypothetical protein LOTGIDRAFT_165375 [Lottia gigantea] | 8.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_120.1_00274.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00274.t1 atgatttatctttactccatgaagctggcaattgcgttgtttttactgtctatttcatcaatagcatgtatcccacttgt agaagaaaataacagatatcagggacggaaacttttgagtaccacaacagaggaaacaccagcgccagcatccttaacgt ctgaatctaaaacgatatgggagaaaatcgaagaattttactctgataaaaataactttgcaatgtaccttgtgttgccg gcaattgtgttagtatacggcgggtgtgcgatgatttactgtatagcgaaatgcagacaatatttcaagcgtaaaaaaga caagaaggacaagagaagactacaggacgatgttgatgacggagagtccgaagatgaaattcttagaaataacaacaatg aaaggaaaatgtcctcccagaacaacgaccgacttaagactgcagcattttcaggaactgtcaacgaacgtccatattct aaggctagtgtatcagatgttagggtagaacagagagaaacgccactaccatgggtcataccggatgaaactgaacccta cccgactaaaaagcatcccccgccagcacgtatcccacttgtagaagaaaataacagatatcagggacggaaacttttga gtaccacaacagaggaaacaccagcgccagcatccgtaacgtctgaatctaaaacgatatgggagaaaatcgaagaattt tactctgataaaaataactttgcaatgtaccttgtgttacctgccattgtgttagtatacggcgggtgtgcgatgattta ctgtatagcgaaatgcagacaatatttcaagcgtaaaaaagacaagaaggacaagagaagactacaggacgatgttgatg atggagagtccgaggatgaaattcttagaaataacaacaatgaaagaaaaatgtcctcccagaacaacgaccgacttaag actgcagcattttcaggaactgtcaacgaacgtccatattctaaggctagtgtatcagatgttagggtagaacagagaga aacgccactaccttgggtcataccggatgaaactgaaccctacccgactaaaaagcatcccccgccagcacgtccacctc ccccacgcacccgccaaccccatgagatggtgatgtctgaatatccaaaggaaggcaagcagaactcccctaatcataac tcagattatccagagaagatgcatcacgacagaaataaagatacttttaatcgtcccgattcaggaactaagaggtacaa ccaacactcaaacatcgacgatcctccccgtaagggatcaccaagacctcaacctgttcccctccatgaaaacccaaaac ggcatggaaaccgccacactgaccaaggaatgatgagtcctcctcccccatacgaaagtcatcagcaccatgccatgggg gcgaatgtattcacagtggattacagcagacgagatgatatacccagaaaagtacctgctcggcctatgtataatcccaa cccaaaggtcaaggtcctctcacagacaagtggtggtggaccggtaagtgaccttgaggcacaggcaatggcacgtcatg ctgctcaattgttacgtctagaagacaaaccagggccaggaatgccgggctacaagaaacccaaaagacttgtttttgtt gccgaataa |
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Protein
| Protein ID | pfu_aug2.0_120.1_00274.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00274.t1 MIYLYSMKLAIALFLLSISSIACIPLVEENNRYQGRKLLSTTTEETPAPASLTSESKTIWEKIEEFYSDKNNFAMYLVLP AIVLVYGGCAMIYCIAKCRQYFKRKKDKKDKRRLQDDVDDGESEDEILRNNNNERKMSSQNNDRLKTAAFSGTVNERPYS KASVSDVRVEQRETPLPWVIPDETEPYPTKKHPPPARIPLVEENNRYQGRKLLSTTTEETPAPASVTSESKTIWEKIEEF YSDKNNFAMYLVLPAIVLVYGGCAMIYCIAKCRQYFKRKKDKKDKRRLQDDVDDGESEDEILRNNNNERKMSSQNNDRLK TAAFSGTVNERPYSKASVSDVRVEQRETPLPWVIPDETEPYPTKKHPPPARPPPPRTRQPHEMVMSEYPKEGKQNSPNHN SDYPEKMHHDRNKDTFNRPDSGTKRYNQHSNIDDPPRKGSPRPQPVPLHENPKRHGNRHTDQGMMSPPPPYESHQHHAMG ANVFTVDYSRRDDIPRKVPARPMYNPNPKVKVLSQTSGGGPVSDLEAQAMARHAAQLLRLEDKPGPGMPGYKKPKRLVFV AE |
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