Gene
| Gene Model ID | pfu_aug2.0_120.1_00280 |
|---|---|
| Locus | scaffold120.1 : 451380 ... 470567 : + |
| To GenomeBrowser | scaffold120.1:451380..470567 |
| Genes list of scaffold | scaffold120.1 |
| Synonym | pfu_aug1.0_10655.1_46248 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 23 member 1 isoform x3 | GO:0015229 GO:0015370 GO:0015711 GO:0044281 GO:0051180 GO:0055085 GO:0090482 GO:0098590 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_120.1_00280.t1 | 3 | 1 | Xan_ur_permease | 86 | 172 | 4.9e-34 | 117.4 | 2.8e-13 | 1.4e-09 | 36.9 |
| pfu_aug2.0_120.1_00280.t1 | 3 | 2 | Xan_ur_permease | 205 | 264 | 4.9e-34 | 117.4 | 0.00035 | 1.7 | 7.0 |
| pfu_aug2.0_120.1_00280.t1 | 3 | 3 | Xan_ur_permease | 291 | 378 | 4.9e-34 | 117.4 | 8.0e-26 | 3.9e-22 | 78.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_120.1_00280.t1 | gi|744540545|ref|XP_010980483.1| | PREDICTED: solute carrier family 23 member 1 isoform X3 [Camelus dromedarius] | 0.0 |
| pfu_aug2.0_120.1_00280.t1 | gi|741880911|ref|XP_010796759.1| | PREDICTED: solute carrier family 23 member 1 isoform X5 [Bos taurus] | 0.0 |
| pfu_aug2.0_120.1_00280.t1 | gi|548474575|ref|XP_005683069.1| | PREDICTED: solute carrier family 23 member 1 isoform X3 [Capra hircus] | 0.0 |
| pfu_aug2.0_120.1_00280.t1 | gi|743750419|ref|XP_010970010.1| | PREDICTED: solute carrier family 23 member 1 isoform X3 [Camelus bactrianus] | 0.0 |
| pfu_aug2.0_120.1_00280.t1 | gi|741933835|ref|XP_010805678.1| | PREDICTED: solute carrier family 23 member 1 isoform X5 [Bos taurus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_120.1_00280.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00280.t1 atggaggcattcaataatgggagattagataatgttccagatgagcagaattggaaaaaggaacacaatggattactgaa tagtgatatggaaggaaacaaccaagatggaaatcatgaaaagaacatcaaattggagtcaacagaatgcctgaattttc caaatcaagaaagtgatcagcctgaagtaataattgaggatcttgatagcacaaaattactgtacaatgtggtggatcat cctcctatttctctgacagttatctccggtctgcagcacacccttttagcattgtccagttccttggcagtgtcgttctt agtggctgatgttgtatgtgccgatcagaatgcggagatcaaatcgacactactcagttccaatttctttatgaatggtc tgacaactatcattatgaatttatttgggatcagattacccttattccaagggtcagccgctgaattcctcattccgtta ttggttatacaggcgatagaaaaagaccgatgcacaatacaacaaagccttgctgcgactgctttagggcagatgtacgt ttcattaaggtgtgctacggtttctcacggcgagctaaggaatgtgttagccgtttcgtcacgttcagtcacgctgcttt tggctattctatttggttggactgtgtgtggtattttaacaacagccggaattttctctgacgatcagtcacatagagaa tatctagccaggacagatgccaaaactgagttcctaggaaaagcaccgtggttcaacattccatatccagaaggcgtaag taaacagtccgttctctgtcggctgtatcgagctcatgcatgttattacccgaggattccgacgactgacattcagagag gacaggttgccagtcgtgatgtatttttagcagcaggaataatattcgtaatatttggtgtaatcgggaaaatatcagcc gttttcctgaccataccgtaccctgtactgggcggcgtactgattgtgatgtatggaatgtttgccggagtgattctatc taatctacaagttgtatcgcttagttcctctagaaaccttgccatcattgggatagccatccttttcggactcatgattc catactggatagaaaacttcccagatcaaatttcagttggttctgaaatgggagatggcattgtcaaaatgttgcttgca aacccaagtctggtcggtggaacgcttgcatgtattctggacaatactgtatctggttctgaaatgggagatggcattgt caaaatgttgcttgcaaacccaagcctggtcggtggaacgcttgcatgtattctagacaatactgtatctggtactaatg atgaacgtggtatatcagcatggagaaaacagattaacgatacagatgaggacggccaaatatatgtcttgggatacgag gtgtatcaacctctattttacaactgggtcatcaagattcctttgataaacaaactaccaattctaccgaaaaagaggag ttaa |
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Protein
| Protein ID | pfu_aug2.0_120.1_00280.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_120.1_00280.t1 MEAFNNGRLDNVPDEQNWKKEHNGLLNSDMEGNNQDGNHEKNIKLESTECLNFPNQESDQPEVIIEDLDSTKLLYNVVDH PPISLTVISGLQHTLLALSSSLAVSFLVADVVCADQNAEIKSTLLSSNFFMNGLTTIIMNLFGIRLPLFQGSAAEFLIPL LVIQAIEKDRCTIQQSLAATALGQMYVSLRCATVSHGELRNVLAVSSRSVTLLLAILFGWTVCGILTTAGIFSDDQSHRE YLARTDAKTEFLGKAPWFNIPYPEGVSKQSVLCRLYRAHACYYPRIPTTDIQRGQVASRDVFLAAGIIFVIFGVIGKISA VFLTIPYPVLGGVLIVMYGMFAGVILSNLQVVSLSSSRNLAIIGIAILFGLMIPYWIENFPDQISVGSEMGDGIVKMLLA NPSLVGGTLACILDNTVSGSEMGDGIVKMLLANPSLVGGTLACILDNTVSGTNDERGISAWRKQINDTDEDGQIYVLGYE VYQPLFYNWVIKIPLINKLPILPKKRS |
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