Gene
| Gene Model ID | pfu_aug2.0_1204.1_14871 |
|---|---|
| Locus | scaffold1204.1 : 133836 ... 134661 : + |
| To GenomeBrowser | scaffold1204.1:133836..134661 |
| Genes list of scaffold | scaffold1204.1 |
| Synonym | pfu_aug1.0_5606.1_23838 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1204.1_14871.t1 | 1 | 1 | Arf | 35 | 164 | 1.1e-06 | 28.0 | 1.6e-09 | 1.6e-06 | 27.4 |
| pfu_aug2.0_1204.1_14871.t1 | 2 | 1 | GTP_EFTU | 39 | 64 | 3.9e-07 | 29.6 | 0.00025 | 0.24 | 10.7 |
| pfu_aug2.0_1204.1_14871.t1 | 1 | 1 | Miro | 42 | 152 | 9.4e-19 | 68.0 | 1.6e-21 | 1.6e-18 | 67.3 |
| pfu_aug2.0_1204.1_14871.t1 | 1 | 1 | MMR_HSR1 | 42 | 146 | 1.0e-07 | 31.8 | 1.5e-10 | 1.5e-07 | 31.3 |
| pfu_aug2.0_1204.1_14871.t1 | 1 | 1 | Ras | 43 | 197 | 2.0e-28 | 98.8 | 2.5e-31 | 2.5e-28 | 98.5 |
| pfu_aug2.0_1204.1_14871.t1 | 2 | 2 | GTP_EFTU | 82 | 154 | 3.9e-07 | 29.6 | 2.2e-06 | 0.0022 | 17.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1204.1_14871.t1 | gi|524871553|ref|XP_005092549.1| | PREDICTED: GTP-binding protein Rhes-like [Aplysia californica] | 4.0e-29 |
| pfu_aug2.0_1204.1_14871.t1 | gi|524906729|ref|XP_005108587.1| | PREDICTED: GTP-binding protein Rhes-like [Aplysia californica] | 1.0e-26 |
| pfu_aug2.0_1204.1_14871.t1 | gi|751799805|ref|XP_011209881.1| | PREDICTED: GTP-binding protein Rhes-like [Bactrocera dorsalis] | 3.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_1204.1_14871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1204.1_14871.t1 atggagtatttgagaatccatagcgactcagtgtcaaaagttctaagaaagctctctgggtgctcatctaagagtagatc aagcgttgatagatgctcagtggaatctgaagataagcatgtcagaattgcagtcctcggtggaacaaaggttgggaaga caactctgataaggcaactggtacatggatgtccaccgaaaaggtacttagaaacaatcgaagatctgtacaaatatcgc atgaacaacggggaggtgctggtagacatattggacacttccggatctgctgagtataactacttccggtcaaaagcgat tgaaaggtatgacggcttcatccttgttttctcggtcaccgacaagaaatccttccatgaggtgaaagacttaaggaacc aaattcgcaagatcagggagaagaaatctgtcccaattgtcgtagcaggaaataggatgggtgatgataaacgatttgtc aaacaggaagtcataactcatatcatatgctcatggggtcttccttatatggagtgttcggcagatgacgtcacaagtat tggcgcggttttcgaaaaggctgtttcccttgtagacgatgatcaggtctcagaatacaggccgtggatgggagggatcg acgagggcagattgttcatcaaagtcccgatagtcacgggagataagatagtttacgactggatgaaagtattttga |
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Protein
| Protein ID | pfu_aug2.0_1204.1_14871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1204.1_14871.t1 MEYLRIHSDSVSKVLRKLSGCSSKSRSSVDRCSVESEDKHVRIAVLGGTKVGKTTLIRQLVHGCPPKRYLETIEDLYKYR MNNGEVLVDILDTSGSAEYNYFRSKAIERYDGFILVFSVTDKKSFHEVKDLRNQIRKIREKKSVPIVVAGNRMGDDKRFV KQEVITHIICSWGLPYMECSADDVTSIGAVFEKAVSLVDDDQVSEYRPWMGGIDEGRLFIKVPIVTGDKIVYDWMKVF |
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