Gene
| Gene Model ID | pfu_aug2.0_1209.1_31521 |
|---|---|
| Locus | scaffold1209.1 : 6013 ... 13755 : - |
| To GenomeBrowser | scaffold1209.1:6013..13755 |
| Genes list of scaffold | scaffold1209.1 |
| Synonym | pfu_aug1.0_16.1_07313 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1209.1_31521.t1 | 1 | 1 | Ependymin | 62 | 192 | 1.5e-22 | 79.7 | 1.3e-26 | 2.0e-22 | 79.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1209.1_31521.t1 | gi|676434937|ref|XP_009047395.1| | hypothetical protein LOTGIDRAFT_151437 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1209.1_31521.t1 | gi|50539892|ref|NP_001002416.1| | mammalian ependymin-related protein 1 precursor [Danio rerio] | 7.0e-39 |
| pfu_aug2.0_1209.1_31521.t1 | gi|602645560|ref|XP_007429218.1| | PREDICTED: mammalian ependymin-related protein 1 [Python bivittatus] | 1.0e-37 |
| pfu_aug2.0_1209.1_31521.t1 | gi|597740830|ref|XP_007232565.1| | PREDICTED: mammalian ependymin-related protein 1 [Astyanax mexicanus] | 6.0e-37 |
| pfu_aug2.0_1209.1_31521.t1 | gi|118086182|ref|XP_418830.2| | PREDICTED: mammalian ependymin-related protein 1 [Gallus gallus] | 4.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1209.1_31521.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31521.t1 atgacgaggatagcgttcgtgcttttagccattttcgcttggaccaacgcccaggccccttccccgtgcgttgcgcccac acaatttgcggcgcgggtatcacagtataatcatggaaccgacaccatcaaccgtttcatcatgcagtatgacgctagca atgaacgttgggtgctctttgaagaaatggatgcatttacaccaggacgcagattctacgagtatcttatcctgacaaga gaaaatgtagaatacaaattcgacctacgttcccacgagtgcaccaaagctcccgcccgaccctggagagcattcggaat ccctctaaatggtacatttgagaacgagtttacacttggaggcccaggggagatgtttgttgctcaacaatggtcggaca gaataccctttagaacaaacgctcagattctcgtcgacgtcacattaatcaattgtttccccttaaaagaagtgctgatt tcaaacaataatgtgacccagacaaccaccacagatttttacgacgttttggagggaaaccccaaccccaatgactttgt ccctcccaaggaatgtttgacagccaagcaagtacaggacaaaccattcacacactggccgtag |
|
Protein
| Protein ID | pfu_aug2.0_1209.1_31521.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31521.t1 MTRIAFVLLAIFAWTNAQAPSPCVAPTQFAARVSQYNHGTDTINRFIMQYDASNERWVLFEEMDAFTPGRRFYEYLILTR ENVEYKFDLRSHECTKAPARPWRAFGIPLNGTFENEFTLGGPGEMFVAQQWSDRIPFRTNAQILVDVTLINCFPLKEVLI SNNNVTQTTTTDFYDVLEGNPNPNDFVPPKECLTAKQVQDKPFTHWP |
|