Gene
| Gene Model ID | pfu_aug2.0_1209.1_31523 |
|---|---|
| Locus | scaffold1209.1 : 27436 ... 47470 : + |
| To GenomeBrowser | scaffold1209.1:27436..47470 |
| Genes list of scaffold | scaffold1209.1 |
| Synonym | pfu_aug1.0_10621.1_53565 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1209.1_31523.t1 | 2 | 1 | Thioredoxin | 29 | 122 | 7.6e-21 | 73.7 | 1.0e-23 | 2.2e-20 | 72.2 |
| pfu_aug2.0_1209.1_31523.t1 | 2 | 1 | Thioredoxin_6 | 82 | 140 | 1.49995e-41 | 142.2 | 0.00045 | 0.94 | 9.2 |
| pfu_aug2.0_1209.1_31523.t1 | 2 | 2 | Thioredoxin_6 | 151 | 335 | 1.49995e-41 | 142.2 | 1.29998e-41 | 2.9e-38 | 131.5 |
| pfu_aug2.0_1209.1_31523.t1 | 2 | 2 | Thioredoxin | 238 | 258 | 7.6e-21 | 73.7 | 2.3 | 5000.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1209.1_31523.t1 | gi|260819710|ref|XP_002605179.1| | hypothetical protein BRAFLDRAFT_122706 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1209.1_31523.t1 | gi|291233075|ref|XP_002736479.1| | PREDICTED: endoplasmic reticulum resident protein 44-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1209.1_31523.t1 | gi|675861036|ref|XP_009016078.1| | hypothetical protein HELRODRAFT_106306 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1209.1_31523.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31523.t1 atgaaaaagttaaatcttgccactttacctgtccactgtgaggtcataccccttgtttcaggaaatattggtagtattat aggttcaagtgaaatagtgttcattaatttttatgcagattggtgtagatttagtcagattttagcgccagtatttgaag aagctgaaaagaaaattagggaagaatttccagacaccagcagagtgaccttagcaaaagttgactgcgatgcagagagt ggtatagctcaacaatatcatatatcaaaatacccgacactaaaactcgtccgaaatggacagctgctgaaaaaagaata tcgaggtcaaaggtcggtggacgccttagcacaatacatcagggatcagttacgaagttctatacaagaacatacaacgt tggaatcgttagatgaagttgatgagaagaagaggcatattataggatattttgctgataaaagttcagaaaattaccga ttatttaccaaattagccagtagtttgagagatgactgccaatttcatgaggctgttggggcattctcagaacctgagag atcagccggggattccatcgtctatagagctccaaataccaaacgacaagatataccataccaagaaggctttcagaact acgaggctttgttgaattgggcaacgtcaaattgtgtacctattgtcagagaaattacttttgaaaatgctgaagaatta acggaggaagggttaccgttccttattcttttccataaaaatgatgactctgctatagtagaaaaatttacccagacagt tcaaagggaacttttatcagagaaaagtggtataaatttcctcactgccgatggagcaaaattccgccaccctcttcatc atttaggaaaatcggagaaagaccttcccatattggctatagatagttttagacatatgtatttgttccctaataatgca caagatatggataaacctggactattgaagcagtttgtcgcagatttacattcgggaaaacttcaccgagaatttcacca cggacctgatccaacgacagcgtatcccacacctccaccgcccccagagtcacaggatacagccgggactccagacgagg ctgcatcacagcatattccccacgatcagaaaccgcaagaggaaggatcggccaaacaacccacgtctccgcctgaatca gtattcaaaaatttagctccatccagaaatagatacacggttttacgggacgaattatag |
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Protein
| Protein ID | pfu_aug2.0_1209.1_31523.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31523.t1 MKKLNLATLPVHCEVIPLVSGNIGSIIGSSEIVFINFYADWCRFSQILAPVFEEAEKKIREEFPDTSRVTLAKVDCDAES GIAQQYHISKYPTLKLVRNGQLLKKEYRGQRSVDALAQYIRDQLRSSIQEHTTLESLDEVDEKKRHIIGYFADKSSENYR LFTKLASSLRDDCQFHEAVGAFSEPERSAGDSIVYRAPNTKRQDIPYQEGFQNYEALLNWATSNCVPIVREITFENAEEL TEEGLPFLILFHKNDDSAIVEKFTQTVQRELLSEKSGINFLTADGAKFRHPLHHLGKSEKDLPILAIDSFRHMYLFPNNA QDMDKPGLLKQFVADLHSGKLHREFHHGPDPTTAYPTPPPPPESQDTAGTPDEAASQHIPHDQKPQEEGSAKQPTSPPES VFKNLAPSRNRYTVLRDEL |
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