Gene
| Gene Model ID | pfu_aug2.0_1209.1_31525 |
|---|---|
| Locus | scaffold1209.1 : 153881 ... 171795 : - |
| To GenomeBrowser | scaffold1209.1:153881..171795 |
| Genes list of scaffold | scaffold1209.1 |
| Synonym | pfu_aug1.0_16.1_07307 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1209.1_31525.t1 | 1 | 1 | GSDH | 86 | 376 | 4.8e-33 | 114.6 | 5.2e-37 | 7.7e-33 | 113.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1209.1_31525.t1 | gi|597769463|ref|XP_007248548.1| | PREDICTED: HHIP-like protein 1-like isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1209.1_31525.t1 | gi|410925965|ref|XP_003976449.1| | 0.0 | |
| pfu_aug2.0_1209.1_31525.t1 | gi|759164213|ref|XP_011373560.1| | PREDICTED: HHIP-like protein 1 [Pteropus vampyrus] | 0.0 |
| pfu_aug2.0_1209.1_31525.t1 | gi|755745337|ref|XP_011281855.1| | PREDICTED: HHIP-like protein 1 [Felis catus] | 0.0 |
| pfu_aug2.0_1209.1_31525.t1 | gi|657571695|ref|XP_008289428.1| | PREDICTED: HHIP-like protein 1 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1209.1_31525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31525.t1 atgtatgtgctgaccattgacgatccagcaacctctaaagaaacaggaaaagtgttcaaaatgttcaacccaaatatagg aaaaatagaatgtttcccgccaccagtgttcgacgatgatactggaaatgaggagacggaagtaaacgaggaagatgttt ccggtgcccaggatgcagcaaattgtgcatgcttcgagccagtcaaatgggatttctatgttccggttcaactcatttcg ccaaatgacggttcgggtagaatattcattgcagatttggaaggaaaggtctcaacattcgacgagaacggggttccctt aataagcactttcttcgagcttgatgataaagtgtatgcacctcaagggccccagcaaggatttttgggtctaacaggaa tgacttttcacccaaattttaaagaaaatggaaaattttacatttcttataccacttggataaaggcgattcaaggattt gttataaaaatcagcgaatatgagacaaaagatatgttaatgaaaattgaccaggataaggaaaaagttcttcttcagat aacgattgagaaccttaacaatgttggaggggagcttatttttgatgaagatggatatcttttgatatttgtcggtgaca actccccggatgttgatggatatcggaatgcccagaaaaaggacaatttccttggaaaagtgttgcggatagacgttgac aacaaggacttgaatcaaacatacagtatcccggatgacaacccttttgtaaacgtcagtgatgacgtcaaaccggaaat attcgcctcgggattaagaaatccgtggcggtgtggtgttgatagaggggatccgtactccggttatggtaagggtagga ttatatgtgtagccactggtcattcctcgttcgatgaaatgaatctgataaagaaaggaaaaaattatggatggagcatc aaggagggatggcagtgttggagtccaacggaatgtgaaaaagttgagctgacagatcctgtatttggccatgatcataa gaaaggattctccctgatcggtggcgctttctatagaggatgtatcaaatacttcagcggcacctacatatacggagaat gggggactgggaagatgtacaagatgtggcagactgttaaccgtacatacgaagatggcggatgggagaacggcgaactc gaaatttgttcgtactgccctgctcctctgactggaactatacatccctacataacagcagtcagggaagatgataaagg ggagttgttcgtgcttgcaatagaggatccaggtggtcaaaacaagacaggaaaagcctataaaatagtatcccctcacc tacgaaaaaccaaatgtgtccctccaaaaccggcaccgacagaaacaaaaagtaatgatgatgatacttcgtcatctaag aacgatgatactgatcaatcaaacaacaaaggtggaattcaagttataatgccgtcacttccgctttctggagaagatgg caatttgctagttgtagaacctgtcgttgttgaaatagaaaatactacccaaaaaggcgtctttctaaaacctataaaaa gttcgaaaacagagtcgggtccaaatttggagacagatgttttacaatctaatgaagatggaggaaatgtattggaatca agtaatccttcaccagcaacattcaacgatgaatcaaacgatttgaaaaataataaagaacagaatgtcattcagagtga taatgaacaagttccaggatcgattcatgcgcaacaaatttcagacgacaaagaaacatccggacatgcgcacgatagtg tgactaatcacaatcatgcgcaacaaatttcagacgacaaagaaacatccggacatgcgcaagagagtgtgactgatcac aattatggatcaaagggagatccgagctcatcagaggaaattcagaatgacataccattcttggattggattggtgggaa tgaagtgaaaaaggaagacgaaacaactaatcctgttccttttgaatccggaaatgtgatgaaggattttctgtttcaat ctgcggagtcgatgaatgacggaaatgaagtatcgcaacagaatcagaacgagggaaagaaaccacgagacactaagaac tcaagctataagcttgatggaaatcttaacattctttctattttcttgatgcttgtctttctaacgaagtattga |
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Protein
| Protein ID | pfu_aug2.0_1209.1_31525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31525.t1 MYVLTIDDPATSKETGKVFKMFNPNIGKIECFPPPVFDDDTGNEETEVNEEDVSGAQDAANCACFEPVKWDFYVPVQLIS PNDGSGRIFIADLEGKVSTFDENGVPLISTFFELDDKVYAPQGPQQGFLGLTGMTFHPNFKENGKFYISYTTWIKAIQGF VIKISEYETKDMLMKIDQDKEKVLLQITIENLNNVGGELIFDEDGYLLIFVGDNSPDVDGYRNAQKKDNFLGKVLRIDVD NKDLNQTYSIPDDNPFVNVSDDVKPEIFASGLRNPWRCGVDRGDPYSGYGKGRIICVATGHSSFDEMNLIKKGKNYGWSI KEGWQCWSPTECEKVELTDPVFGHDHKKGFSLIGGAFYRGCIKYFSGTYIYGEWGTGKMYKMWQTVNRTYEDGGWENGEL EICSYCPAPLTGTIHPYITAVREDDKGELFVLAIEDPGGQNKTGKAYKIVSPHLRKTKCVPPKPAPTETKSNDDDTSSSK NDDTDQSNNKGGIQVIMPSLPLSGEDGNLLVVEPVVVEIENTTQKGVFLKPIKSSKTESGPNLETDVLQSNEDGGNVLES SNPSPATFNDESNDLKNNKEQNVIQSDNEQVPGSIHAQQISDDKETSGHAHDSVTNHNHAQQISDDKETSGHAQESVTDH NYGSKGDPSSSEEIQNDIPFLDWIGGNEVKKEDETTNPVPFESGNVMKDFLFQSAESMNDGNEVSQQNQNEGKKPRDTKN SSYKLDGNLNILSIFLMLVFLTKY |
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