Gene
| Gene Model ID | pfu_aug2.0_1209.1_31526 |
|---|---|
| Locus | scaffold1209.1 : 173405 ... 186627 : - |
| To GenomeBrowser | scaffold1209.1:173405..186627 |
| Genes list of scaffold | scaffold1209.1 |
| Synonym | pfu_aug1.0_16.1_07307 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1209.1_31526.t1 | 1 | 1 | GSDH | 302 | 462 | 1.4e-15 | 57.1 | 3.0e-19 | 2.2e-15 | 56.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1209.1_31526.t1 | gi|573878961|ref|XP_006627703.1| | PREDICTED: HHIP-like protein 1-like [Lepisosteus oculatus] | 5.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_1209.1_31526.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31526.t1 atggcgatggagacaaacgaaataggcgagaaccctttgaacaatagggtagatgacgagttcggtgaaggtgtaatggc ggcgcccgtcatcatgaaggtgaatgacaaaaatgtaaacaatgaagtagtttgttgcttagacattagtagtgtgaata cagcagaaacctgtgaatgcagtgcacttgaatcagatacatgtaataaacaagacaggaagcggggtaggctagatgtc gacggagacgagctgtgcaacaaacgagcaaaacgatgcaatcagatcgagggggaaagcgcgcacaaagacgctatttc aaacatacttaagctggttgaaaacttgtcattagaggtccaaaatatgaatgtgaaagtatttgacagaatggattcct tggaaaagactttcgctaaaaatgttgtcgaaaatattaccaaacttgtcgactgtaagattgacaaagtacgtaaagac gttgcattggaaattgagggagtaaagacaacaataaacaaggtagaggaaaaatgtgctcaagaattacagcgcctgaa aatgaacgtgaaagaggacattaaacgagaagtcgaatgtgcatcgcgttcccgtgcaggcagttatgcaaatgcagtgt cgaccaatgctgcacaccccataaacgttgtaataaaaaatctcccagagaaaaggggtgaaaaggatgactcgtcgatc attaaagcaaatgtagagggcctaattcgagacggactacgtctgagagacgtcaaggtaaccaaagcagtgaggaaggg aagcaacccaaacgcaaagagaccaggactgatcgtcgctacattggaaacaacacaacagcgagataaagtgatggaag acaaacacaaactaaaatctagtagtaggtggtcgtactacgggaaggtattacgtatagatgtagatgacagattacaa ggtgtaccatatggagtacccgaggacaatccttatgttaacttcggcagcattaaaccgcagatctacgcatctggctt ccgttctccctggcgatgtggtgtcgatagaggggaccccgaaacaggttacgggaaaggcagagtaatatgtgtagaat ccgggtactcgcagtatgacgaagtcaattatatcaagaaaggtgcaaattacggatggagcatgaaagaaggaacatcc tgttggagtcctatggaatgtgaacaagaaaatctcgaggatccaatattttcacaaatgttccagtcaggaatgtcatt agtgggtggggccttttacagaggctgtattcagcagttacatgggaccttcgtgttcggaagatggggcgacgggaagt tatatacggtatggtacaatgaagggaaacctggcatggatggttattgggaacagggaacggtagagccgtgcggtctc tgtccggaacaagcaacagataccctacctaaatacatcacggcaataagggaaggcgaatatgtttcaaagtcgagaag gcaaggcaaattcattagaatttccattggaacggttgcgaaccccggaacgaacatcactccgaagcgagaccaggcgc ccgaggagaatcagcgcattaaacatgaagaacaacgctag |
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Protein
| Protein ID | pfu_aug2.0_1209.1_31526.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1209.1_31526.t1 MAMETNEIGENPLNNRVDDEFGEGVMAAPVIMKVNDKNVNNEVVCCLDISSVNTAETCECSALESDTCNKQDRKRGRLDV DGDELCNKRAKRCNQIEGESAHKDAISNILKLVENLSLEVQNMNVKVFDRMDSLEKTFAKNVVENITKLVDCKIDKVRKD VALEIEGVKTTINKVEEKCAQELQRLKMNVKEDIKREVECASRSRAGSYANAVSTNAAHPINVVIKNLPEKRGEKDDSSI IKANVEGLIRDGLRLRDVKVTKAVRKGSNPNAKRPGLIVATLETTQQRDKVMEDKHKLKSSSRWSYYGKVLRIDVDDRLQ GVPYGVPEDNPYVNFGSIKPQIYASGFRSPWRCGVDRGDPETGYGKGRVICVESGYSQYDEVNYIKKGANYGWSMKEGTS CWSPMECEQENLEDPIFSQMFQSGMSLVGGAFYRGCIQQLHGTFVFGRWGDGKLYTVWYNEGKPGMDGYWEQGTVEPCGL CPEQATDTLPKYITAIREGEYVSKSRRQGKFIRISIGTVANPGTNITPKRDQAPEENQRIKHEEQR |
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