Gene
| Gene Model ID | pfu_aug2.0_121.1_03661 |
|---|---|
| Locus | scaffold121.1 : 156986 ... 163923 : + |
| To GenomeBrowser | scaffold121.1:156986..163923 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | pfu_aug1.0_6721.1_09412 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_121.1_03661.t2 | 1 | 1 | 7tm_2 | 72 | 231 | 4.5e-10 | 39.0 | 8.9e-14 | 6.6e-10 | 38.4 |
| pfu_aug2.0_121.1_03661.t2 | 1 | 1 | Dicty_CAR | 77 | 231 | 1.6e-07 | 30.5 | 5.5e-11 | 4.1e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_121.1_03661.t2 | gi|449677806|ref|XP_004208930.1| | 7.0e-25 | |
| pfu_aug2.0_121.1_03661.t2 | gi|657529297|ref|XP_008294046.1| | PREDICTED: probable G-protein coupled receptor 157 [Stegastes partitus] | 1.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_121.1_03661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03661.t1 atgttacttaaattaattacatatgtactagttaaagtgctgagtggattatatttcttcaaagcggaagaaaagtccaa acttggcaccgtagaaaccatggcaactgtggaaactgaactaccggtgtcaacgtttctttatacaacagactcaacta acgttacgtcagtgccatcatggataattccaaatacactgccgacttctgttctgatctgtaccggggtagcttcctca ctatccattctcggagcggtgttaatttttgtgacgtactgtaccgttgaaagcgcaagaaatcagacgcgtcgtctcct tatttacctgacgatatcagattttctgataagtgctgggaacttgttaggaaccatacggtatgctttaagattcaata aagaaatcaccgaccgggacattgttcgtaactgtaggcattccgatgagatctgcgtcattcagagctgcgtcaccacc tttgcgtcacttgcgtcattcggatggacagttgtgattggtgtacaccttctgacatcattagtttaccagaggtccat gggtaaaaaaccgaggattatctctcatctgatctgctggggagttccaattaccataacaacgattgctgcattttgga acgtgttaggtgaggattatgccctgagtagtggaccgtggtgttggatacgtggctgtttgaggtcagacaatgacatc attatatggatgactgtcaccggcaaaggatgggaaatccttacctacgtattagctgccaatttctatatctatctcaa attgttcatgtgcaaacagcgcaggtcagccaatcggagaatcggttattatgaacagtccggaagttcctatctgcgca tgcgccttagagatgaagatgagatctatgtcttgcagtggttactgttgtacgtccttaggatctggggcacggtgaga tacggcttggccatgaataaaataggaggacaccatctgataccctctcatgataaagtggactttgtcttgctccacat gcaaagcgttggcgacagcagccatgctttcttcaattgtattttgttttgtttttgtgataaaactgtgaggacatcca ttttaagaagactgaaggcttgttgcagacgacagggcgagtatcaagagctgattgatccagcattgaattga |
|
| Transcript ID | pfu_aug2.0_121.1_03661.t2 |
| Definition | - |
>pfu_aug2.0_121.1_03661.t2 atgttacttaaattaattacatatgtactagttaaagtgctgagtggattatatttcttcaaagcggaagaaaagtccaa acttggcaccgtagaaaccatggcaactgtggaaactgaactaccggtgtcaacgtttctttatacaacagactcaacta acgttacgtcagtgccatcatggataattccaaatacactgccgacttctgttctgatctgtaccggggtagcttcctca ctatccattctcggagcggtgttaatttttgtgacgtactgtaccgttgaaagcgcaagaaatcagacgcgtcgtctcct tatttacctgacgatatcagattttctgataagtgctgggaacttgttaggaaccatacggtatgctttaagattcaata aagaaatcaccgaccgggacattgttcgtaactgtaggcattccgatgagatctgcgtcattcagagctgcgtcaccacc tttgcgtcacttgcgtcattcggatggacagttgtgattggtgtacaccttctgacatcattagtttaccagaggtccat gggtaaaaaaccgaggattatctctcatctgatctgctggggagttccaattaccataacaacgattgctgcattttgga acgtgttaggtgaggattatgccctgagtagtggaccgtggtgttggatacgtggctgtttgaggtcagacaatgacatc attatatggatgactgtcaccggcaaaggatgggaaatccttacctacgtattagctgccaatttctatatctatctcaa attgttcatgtgcaaacaggtatag |
|
Protein
| Protein ID | pfu_aug2.0_121.1_03661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03661.t1 MLLKLITYVLVKVLSGLYFFKAEEKSKLGTVETMATVETELPVSTFLYTTDSTNVTSVPSWIIPNTLPTSVLICTGVASS LSILGAVLIFVTYCTVESARNQTRRLLIYLTISDFLISAGNLLGTIRYALRFNKEITDRDIVRNCRHSDEICVIQSCVTT FASLASFGWTVVIGVHLLTSLVYQRSMGKKPRIISHLICWGVPITITTIAAFWNVLGEDYALSSGPWCWIRGCLRSDNDI IIWMTVTGKGWEILTYVLAANFYIYLKLFMCKQRRSANRRIGYYEQSGSSYLRMRLRDEDEIYVLQWLLLYVLRIWGTVR YGLAMNKIGGHHLIPSHDKVDFVLLHMQSVGDSSHAFFNCILFCFCDKTVRTSILRRLKACCRRQGEYQELIDPALN |
|
| Protein ID | pfu_aug2.0_121.1_03661.t2 |
| Definition | - |
>pfu_aug2.0_121.1_03661.t2 MLLKLITYVLVKVLSGLYFFKAEEKSKLGTVETMATVETELPVSTFLYTTDSTNVTSVPSWIIPNTLPTSVLICTGVASS LSILGAVLIFVTYCTVESARNQTRRLLIYLTISDFLISAGNLLGTIRYALRFNKEITDRDIVRNCRHSDEICVIQSCVTT FASLASFGWTVVIGVHLLTSLVYQRSMGKKPRIISHLICWGVPITITTIAAFWNVLGEDYALSSGPWCWIRGCLRSDNDI IIWMTVTGKGWEILTYVLAANFYIYLKLFMCKQV |
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