Gene
| Gene Model ID | pfu_aug2.0_121.1_03662 |
|---|---|
| Locus | scaffold121.1 : 185968 ... 208932 : + |
| To GenomeBrowser | scaffold121.1:185968..208932 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | pfu_aug1.0_87322.1_35041 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0005622 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_121.1_03662.t1 | 1 | 1 | Ribosomal_L19 | 93 | 187 | 7.6e-17 | 61.1 | 1.2e-20 | 1.8e-16 | 59.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_121.1_03662.t1 | gi|676475084|ref|XP_009060358.1| | hypothetical protein LOTGIDRAFT_210367 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_121.1_03662.t1 | gi|524873188|ref|XP_005093345.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_121.1_03662.t1 | gi|512927199|ref|XP_004931275.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial [Bombyx mori] | 0.0 |
| pfu_aug2.0_121.1_03662.t1 | gi|751212093|ref|XP_011158807.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_121.1_03662.t1 | gi|752868310|ref|XP_011251225.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_121.1_03662.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03662.t1 atgtcccttaccaaagcatgtagtcaactattcagtgtcattttcaaagaaaaagtaaagaggtcagttcctctccgata tgcatcacagcagaatgttgttacacagtatgtgctagacaagcatcggcgttcagactataactatgacagggtacccg aggatgaagttctaccgacagaggcaccaagggactacctgcaggtgtatcctgaatacctcccaaggccagactggtcg tccagggacaaacttctcgagaaaatggcccgtagagatatgaataatcgcagagctgtcatgaacataccagaatttta tgtaggcagtattctagctgtaacaattggtgatgaatttgcccccaagaaggtgaaccgttttgttggtatatgtatag agagagggggacacatgctatatcattggtttattctgcgaaatgttgtcgatggatcaggtgtggaaatgaagtatgag ttgtacaatccattaatacagaaaatagaagttctgaagcttgagaagagattagatgataacctaacatatctaaggga ctgtccagcagaatatagcactttcccatttaaccttgatgctgtacctctgccaaaaggcatgacagtgcctgtcaacc cattaaaggtaaaattaaaccctcctccttggctagaaagatgggagagaatggaactcaaaggagtagaaaataacacc agaaaactaacgaaaaaacagcagattagggctgaactctccaaaaaaccatgggagaaacatgatttaatgttacagta tagagggagtataaatgaagtggagaaagaccaaatcatgagagaaatttatcatgaaaatttaagaaaagaaaagaaaa agaaagtaaaaaagtttgaaagttag |
|
Protein
| Protein ID | pfu_aug2.0_121.1_03662.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03662.t1 MSLTKACSQLFSVIFKEKVKRSVPLRYASQQNVVTQYVLDKHRRSDYNYDRVPEDEVLPTEAPRDYLQVYPEYLPRPDWS SRDKLLEKMARRDMNNRRAVMNIPEFYVGSILAVTIGDEFAPKKVNRFVGICIERGGHMLYHWFILRNVVDGSGVEMKYE LYNPLIQKIEVLKLEKRLDDNLTYLRDCPAEYSTFPFNLDAVPLPKGMTVPVNPLKVKLNPPPWLERWERMELKGVENNT RKLTKKQQIRAELSKKPWEKHDLMLQYRGSINEVEKDQIMREIYHENLRKEKKKKVKKFES |
|