Gene
Gene Model ID | pfu_aug2.0_121.1_03662 |
---|---|
Locus | scaffold121.1 : 185968 ... 208932 : + |
To GenomeBrowser | scaffold121.1:185968..208932 |
Genes list of scaffold | scaffold121.1 |
Synonym | pfu_aug1.0_87322.1_35041 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
39s ribosomal protein mitochondrial | GO:0005622 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_121.1_03662.t1 | 1 | 1 | Ribosomal_L19 | 93 | 187 | 7.6e-17 | 61.1 | 1.2e-20 | 1.8e-16 | 59.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_121.1_03662.t1 | gi|676475084|ref|XP_009060358.1| | hypothetical protein LOTGIDRAFT_210367 [Lottia gigantea] | 0.0 |
pfu_aug2.0_121.1_03662.t1 | gi|524873188|ref|XP_005093345.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial-like [Aplysia californica] | 0.0 |
pfu_aug2.0_121.1_03662.t1 | gi|512927199|ref|XP_004931275.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial [Bombyx mori] | 0.0 |
pfu_aug2.0_121.1_03662.t1 | gi|751212093|ref|XP_011158807.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial [Solenopsis invicta] | 0.0 |
pfu_aug2.0_121.1_03662.t1 | gi|752868310|ref|XP_011251225.1| | PREDICTED: 39S ribosomal protein L19, mitochondrial [Camponotus floridanus] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_121.1_03662.t1 |
---|---|
Definition | - |
>pfu_aug2.0_121.1_03662.t1 atgtcccttaccaaagcatgtagtcaactattcagtgtcattttcaaagaaaaagtaaagaggtcagttcctctccgata tgcatcacagcagaatgttgttacacagtatgtgctagacaagcatcggcgttcagactataactatgacagggtacccg aggatgaagttctaccgacagaggcaccaagggactacctgcaggtgtatcctgaatacctcccaaggccagactggtcg tccagggacaaacttctcgagaaaatggcccgtagagatatgaataatcgcagagctgtcatgaacataccagaatttta tgtaggcagtattctagctgtaacaattggtgatgaatttgcccccaagaaggtgaaccgttttgttggtatatgtatag agagagggggacacatgctatatcattggtttattctgcgaaatgttgtcgatggatcaggtgtggaaatgaagtatgag ttgtacaatccattaatacagaaaatagaagttctgaagcttgagaagagattagatgataacctaacatatctaaggga ctgtccagcagaatatagcactttcccatttaaccttgatgctgtacctctgccaaaaggcatgacagtgcctgtcaacc cattaaaggtaaaattaaaccctcctccttggctagaaagatgggagagaatggaactcaaaggagtagaaaataacacc agaaaactaacgaaaaaacagcagattagggctgaactctccaaaaaaccatgggagaaacatgatttaatgttacagta tagagggagtataaatgaagtggagaaagaccaaatcatgagagaaatttatcatgaaaatttaagaaaagaaaagaaaa agaaagtaaaaaagtttgaaagttag |
Protein
Protein ID | pfu_aug2.0_121.1_03662.t1 |
---|---|
Definition | - |
>pfu_aug2.0_121.1_03662.t1 MSLTKACSQLFSVIFKEKVKRSVPLRYASQQNVVTQYVLDKHRRSDYNYDRVPEDEVLPTEAPRDYLQVYPEYLPRPDWS SRDKLLEKMARRDMNNRRAVMNIPEFYVGSILAVTIGDEFAPKKVNRFVGICIERGGHMLYHWFILRNVVDGSGVEMKYE LYNPLIQKIEVLKLEKRLDDNLTYLRDCPAEYSTFPFNLDAVPLPKGMTVPVNPLKVKLNPPPWLERWERMELKGVENNT RKLTKKQQIRAELSKKPWEKHDLMLQYRGSINEVEKDQIMREIYHENLRKEKKKKVKKFES |