Gene
Gene Model ID | pfu_aug2.0_121.1_03664 |
---|---|
Locus | scaffold121.1 : 277808 ... 279193 : + |
To GenomeBrowser | scaffold121.1:277808..279193 |
Genes list of scaffold | scaffold121.1 |
Synonym | pfu_aug1.0_4438.1_23573 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
neuromedin-b receptor | GO:0009987 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_121.1_03664.t1 | 1 | 1 | 7tm_1 | 24 | 86 | 2.5e-09 | 36.6 | 4.3e-13 | 3.2e-09 | 36.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_121.1_03664.t1 | gi|524884038|ref|XP_005098643.1| | PREDICTED: kiSS-1 receptor-like [Aplysia californica] | 2.0e-27 |
pfu_aug2.0_121.1_03664.t1 | gi|676475090|ref|XP_009060360.1| | hypothetical protein LOTGIDRAFT_95484, partial [Lottia gigantea] | 1.0e-25 |
pfu_aug2.0_121.1_03664.t1 | gi|746856162|ref|XP_011058764.1| | PREDICTED: neuromedin-B receptor isoform X2 [Acromyrmex echinatior] | 9.0e-19 |
Transcript
Transcript ID | pfu_aug2.0_121.1_03664.t1 |
---|---|
Definition | - |
>pfu_aug2.0_121.1_03664.t1 atggaagcaagactgtcagtacaatcccaaggaacatgtgatgaagaggaagcattggccaatgaaatatggaatcgaag aagaattacagctataatcgcttgtctgatttttcttttcgttatttgttggttacctcgtcacatctatctcatgtggt atcattttgatccaggacagtataccatgttctggcatatcttcaaaattcttggcttctgtttgatattcattaattca gctgcaaatcccttagtgtttttcctactcgagagtcgatttagaagattcgttgttaattgctatctgtgtcagagtcg ttcaacaggtacggagtccagagctcagggaatcgccgttccacaccagactattatcctaacagatctgatttccggtg agaaaactgatgccatctaa |
Protein
Protein ID | pfu_aug2.0_121.1_03664.t1 |
---|---|
Definition | - |
>pfu_aug2.0_121.1_03664.t1 MEARLSVQSQGTCDEEEALANEIWNRRRITAIIACLIFLFVICWLPRHIYLMWYHFDPGQYTMFWHIFKILGFCLIFINS AANPLVFFLLESRFRRFVVNCYLCQSRSTGTESRAQGIAVPHQTIILTDLISGEKTDAI |