Gene
| Gene Model ID | pfu_aug2.0_121.1_03670 |
|---|---|
| Locus | scaffold121.1 : 412698 ... 414682 : + |
| To GenomeBrowser | scaffold121.1:412698..414682 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | pfu_aug1.0_124743.1_49767 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lambda-crystallin homolog | GO:0003857 GO:0006631 GO:0055114 GO:0070403 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_121.1_03670.t1 | 2 | 1 | 3HCDH_N | 2 | 167 | 2.0e-36 | 125.3 | 4.39999e-40 | 3.3e-36 | 124.6 |
| pfu_aug2.0_121.1_03670.t1 | 1 | 1 | 3HCDH | 170 | 222 | 6.3e-13 | 48.9 | 1.5e-16 | 1.1e-12 | 48.1 |
| pfu_aug2.0_121.1_03670.t1 | 2 | 2 | 3HCDH_N | 182 | 203 | 2.0e-36 | 125.3 | 0.9 | 6600.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_121.1_03670.t1 | gi|676461615|ref|XP_009056000.1| | hypothetical protein LOTGIDRAFT_95422, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_121.1_03670.t1 | gi|524909258|ref|XP_005109678.1| | PREDICTED: lambda-crystallin homolog isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_121.1_03670.t1 | gi|524909260|ref|XP_005109679.1| | PREDICTED: lambda-crystallin homolog isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_121.1_03670.t1 | gi|524909256|ref|XP_005109677.1| | PREDICTED: lambda-crystallin homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_121.1_03670.t1 | gi|156547253|ref|XP_001601340.1| | PREDICTED: lambda-crystallin homolog [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_121.1_03670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03670.t1 atgctgtacgctgcaagtggttacaatgtgaaattatacgacatagaagccagtcagatagagggagctatgaaagatat atgtgaccagctggaacatttggataagacaggatttcttaggggaaagttgactgtgacggaacaaaataaccttatca ccggaacaaatgacctggctgaatgtgtcaagggtgccttctttgtacaggaatgcgtacctgaaatcttagacataaag cggaatgttcatagcaagatagattgcatggttggcaatgacgttattctggccagttcagctagtgcacttgtaccatc cttgatatcagaaaaactgcagcacaagaacagattcatagtagtccatccgaccaatccacccttctatgcaccactta tagagctagttccagcaccatggacagatgctgacgttttacctcgtacgaaggaactgatgttagagatcggacaggta cccgttacactactaaaggagattgatggcttcgttctcaacagaattcagtatgctataattggagagtgctggagatt agttaaggacggtgttatgagtactgaagacatagacaaagtgatgtcagagggacttggccgccgttatgccttcatgg gacctcttgaaacagcgtatctgaatgctgatggtaaacgttga |
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Protein
| Protein ID | pfu_aug2.0_121.1_03670.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03670.t1 MLYAASGYNVKLYDIEASQIEGAMKDICDQLEHLDKTGFLRGKLTVTEQNNLITGTNDLAECVKGAFFVQECVPEILDIK RNVHSKIDCMVGNDVILASSASALVPSLISEKLQHKNRFIVVHPTNPPFYAPLIELVPAPWTDADVLPRTKELMLEIGQV PVTLLKEIDGFVLNRIQYAIIGECWRLVKDGVMSTEDIDKVMSEGLGRRYAFMGPLETAYLNADGKR |
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