Gene
| Gene Model ID | pfu_aug2.0_121.1_03671 |
|---|---|
| Locus | scaffold121.1 : 423468 ... 432535 : + |
| To GenomeBrowser | scaffold121.1:423468..432535 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | pfu_aug1.0_28015.1_26400 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lambda-crystallin homolog | GO:0005488 GO:0016616 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_121.1_03671.t1 | 1 | 1 | 3HCDH_N | 3 | 125 | 1.3e-24 | 86.8 | 3.5e-28 | 1.7e-24 | 86.4 |
| pfu_aug2.0_121.1_03671.t1 | 1 | 1 | 3HCDH | 126 | 185 | 2.0e-06 | 28.1 | 7.7e-10 | 3.8e-06 | 27.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_121.1_03671.t1 | gi|554576181|ref|XP_005880071.1| | PREDICTED: lambda-crystallin homolog isoform X5 [Myotis brandtii] | 0.0 |
| pfu_aug2.0_121.1_03671.t1 | gi|558110499|ref|XP_006085560.1| | PREDICTED: lambda-crystallin homolog isoform X5 [Myotis lucifugus] | 0.0 |
| pfu_aug2.0_121.1_03671.t1 | gi|545190109|ref|XP_005601222.1| | PREDICTED: lambda-crystallin homolog [Equus caballus] | 0.0 |
| pfu_aug2.0_121.1_03671.t1 | gi|752896300|ref|XP_011266404.1| | PREDICTED: lambda-crystallin homolog [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_121.1_03671.t1 | gi|759065286|ref|XP_011342070.1| | PREDICTED: lambda-crystallin homolog [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_121.1_03671.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03671.t1 atgctttacgccgctggtggatacaatgtgaaattatacgacatagaagccagtcagatagagggagctatgaaagatat acgtgaccagctggtacatttggataagacaggatttctaaggggaaagttgactgtgacggaacaagaaaacctcatta ctggaacaaatgatctggctgaatgtgtcaaggatgccttctttattcaagagtgtgtaccagagaaactagaaatgaag caacaagtacacagccagatagactgtctgatgaacaaagacgccatactctccagttcctccagtgccattgttccctc agcgatatcacagaaaatcaaacataaaaaccgattcattgtcgtccatccaagtgacataatgagccccgaagacatag ataaagtaatgtcggaaggtttaggtaggagatacgctttcatcggaccgtttgaaaccatccatctcaactctgaaggt ttacgtagctgctgtgagcggtacggggacaccatataccgagtacagcgtacgttcagtgaaccagagaggatggaggg tgacgtcatgaaggtcattcaccaggacatggtcagcagggtacctcttgaccagctcaccgaaaggaggaaatggcgag acaccagactggcagctctagataaactcaaacgagatatggaaaataaatag |
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Protein
| Protein ID | pfu_aug2.0_121.1_03671.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03671.t1 MLYAAGGYNVKLYDIEASQIEGAMKDIRDQLVHLDKTGFLRGKLTVTEQENLITGTNDLAECVKDAFFIQECVPEKLEMK QQVHSQIDCLMNKDAILSSSSSAIVPSAISQKIKHKNRFIVVHPSDIMSPEDIDKVMSEGLGRRYAFIGPFETIHLNSEG LRSCCERYGDTIYRVQRTFSEPERMEGDVMKVIHQDMVSRVPLDQLTERRKWRDTRLAALDKLKRDMENK |
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