Gene
| Gene Model ID | pfu_aug2.0_121.1_03673 |
|---|---|
| Locus | scaffold121.1 : 442504 ... 467927 : - |
| To GenomeBrowser | scaffold121.1:442504..467927 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | pfu_aug1.0_6509.1_67448 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_121.1_03673.t3 | 8 | 1 | Tropomyosin | 6 | 81 | 0.0 | 400.0 | 7.5e-11 | 1.2e-07 | 31.0 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 1 | Tropomyosin_1 | 7 | 122 | 4.30002e-41 | 140.1 | 5.4e-19 | 8.9e-16 | 58.0 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 2 | Tropomyosin_1 | 81 | 187 | 4.30002e-41 | 140.1 | 1.7e-19 | 2.8e-16 | 59.6 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 2 | Tropomyosin | 85 | 201 | 0.0 | 400.0 | 2.3e-33 | 3.8e-30 | 104.7 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 3 | Tropomyosin_1 | 164 | 274 | 4.30002e-41 | 140.1 | 6.2e-10 | 1.0e-06 | 28.6 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 3 | Tropomyosin | 204 | 232 | 0.0 | 400.0 | 3.8e-06 | 0.0062 | 15.6 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 4 | Tropomyosin | 248 | 290 | 0.0 | 400.0 | 3.1e-17 | 5.1e-14 | 51.9 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 5 | Tropomyosin | 311 | 373 | 0.0 | 400.0 | 1.5e-22 | 2.4e-19 | 69.3 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 4 | Tropomyosin_1 | 311 | 337 | 4.30002e-41 | 140.1 | 0.00019 | 0.31 | 10.8 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 5 | Tropomyosin_1 | 341 | 443 | 4.30002e-41 | 140.1 | 8.4e-05 | 0.14 | 12.0 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 6 | Tropomyosin | 396 | 444 | 0.0 | 400.0 | 1.7e-12 | 2.9e-09 | 36.3 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 6 | Tropomyosin_1 | 476 | 499 | 4.30002e-41 | 140.1 | 0.17 | 280.0 | 1.2 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 7 | Tropomyosin | 478 | 505 | 0.0 | 400.0 | 1.6e-06 | 0.0026 | 16.8 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 7 | Tropomyosin_1 | 503 | 540 | 4.30002e-41 | 140.1 | 0.41 | 670.0 | 0.0 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 8 | Tropomyosin | 506 | 602 | 0.0 | 400.0 | 2.9e-35 | 4.8e-32 | 110.9 |
| pfu_aug2.0_121.1_03673.t3 | 8 | 8 | Tropomyosin_1 | 522 | 594 | 4.30002e-41 | 140.1 | 8.1e-05 | 0.13 | 12.0 |
Transcript
| Transcript ID | pfu_aug2.0_121.1_03673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03673.t1 atggacgccatcaagaagaagatgattgcgatgaaaacggagaaagagaatgctcttgaccgcgcagagcagctcgaaca aaaattaagggatacagaagaagagaagacaaaggttgaagacgaattaagtgctcttcaaaagaaacactcgaacttag aaaacgaattcgattccatcaacgagaaatatcaggaagcacaaactaagttagaagcggcagagaaggcagcatccgag acgctgaaggataaaatgcaatgtctcagggacgaaaaggacaaattactagatgagaatgaaaccttaactaaaaagtg cgaagcggagagggcgagaagtgaagcagcagaacaagaggttcaaggtttgaacaggaggatacagctgttagaggaag acttagaaagatctgaagaaagattacagtctgccacagaaaaattagaggaggcttctaaagctgcagatgagagtgaa agagcctgtcgtagtttaacaaagaagtgccagatggatgacgataggatagaggtattagaatcacaagtaaaacagac agattttatagtccgtgatacggaacaaaaatacgatgagagcagtttggatgatggtaggatagaggcattagaatcaa accttaaacagacagaatttgtaaccaatgaggcggaacaaaaatatgaagaggtatggcactacccaaaagatggagac tcctctactctttggtggtgaggacgtaaagttttagagagtagaaatgtctctgatgatgagagaatagatgccctgga acagcaactgaaagaagctaaatatgttgccgaggatgcagatagaaaatatgatgaggtgacaataatgcttgtaccta gaatcatcactaggaacagcatgacaacttctcttgtgcaattgtacataaaccgcaaggtcttggaaaacctgaacaat gcatcagaggagaggtcagacgtgctggagaaacagttatctgaggccaaatggatcgcagaggaagcagacaaaaaata tgatgaggcagcacgtaaacttgctatcacagaggttgaccttgagcgtgccgaagctcgtttggaggcagctgaggcta tttcaaattctgaaatagataatatgatagaaaatgcttcatttgaattgttgaggtgtgtgtatgctgcacggaaatgt atgatccttgaaactgaattagagaagacagaaatgagatgtgaacaagcagaaagtaagtgcaaggccttagaggagga attacattgcacctcttactccctgaaatcacttgaacaaaatgaatcgcaggcctcacagcgggaggacagctacgagg agaccattcgtgaccttacacagcggctgaaggatgctgaaaaccgtgccactgaagctgaaaggacagtatccaaattg cagaaagaagtcgacaggttggaagatgaattgctttcggagaaggagagatacaaagcgattagtgacgagttggatca gacctttgccgagcttgcaggatactaa |
|
| Transcript ID | pfu_aug2.0_121.1_03673.t2 |
| Definition | - |
>pfu_aug2.0_121.1_03673.t2 atggacgccatcaagaagaagatgattgcgatgaaaacggagaaagagaatgctcttgaccgcgcagagcagctcgaaca aaaattaagggatacagaagaagagaagacaaaggttgaagacgaattaagtgctcttcaaaagaaacactcgaacttag aaaacgaattcgattccatcaacgagaaatatcaggaagcacaaactaagttagaagcggcagagaaggcagcatccgag gcagaacaagaggttcaaggtttgaacaggaggatacagctgttagaggaagacttagaaagatctgaagaaagattaca gtctgccacagaaaaattagaggaggcttctaaagctgcagatgagagtgaaagagcctgtcgtagtttaacaaagaagt gccagatggatgacgataggatagaggtattagaatcacaagtaaaacagacagattttatagtccgtgatacggaacaa aaatacgatgagagcagtttggatgatggtaggatagaggcattagaatcaaaccttaaacagacagaatttgtaaccaa tgaggcggaacaaaaatatgaagaggtatggcactacccaaaagatggagactcctctactctttggtggtgaggacgta aagttttagagagtagaaatgtctctgatgatgagagaatagatgccctggaacagcaactgaaagaagctaaatatgtt gccgaggatgcagatagaaaatatgatgaggtgacaataatgcttgtacctagaatcatcactaggaacagcatgacaac ttctcttgtgcaattgtacataaaccgcaaggtcttggaaaacctgaacaatgcatcagaggagaggtcagacgtgctgg agaaacagttatctgaggccaaatggatcgcagaggaagcagacaaaaaatatgatgaggcagcacgtaaacttgctatc acagaggttgaccttgagcgtgccgaagctcgtttggaggcagctgaggctatttcaaattctgaaatagataatatgat agaaaatgcttcatttgaattgttgaggtgtgtgtatgctgcacggaaatgtatgatccttgaaactgaattagagaaga cagaaatgagatgtgaacaagcagaaagtaagtgcaaggccttagaggaggaattacattgcacctcttactccctgaaa tcacttgaacaaaatgaatcgcagggtaaggttgctctcctttgtcgacctcctattgggcccaatcatgccatggaagc tacagtacatggcacactgtgtaaatccatgtctcttcacctttccagcaaaattattaaccttgaagaagagctgacag ttgtgggtgccaatatcaaaaccctacaggtccaaaatgaccaggtaaggaaaattttggaattggaagaggagcttaaa gtggtgggaaacaacatgaaatctttggagatttccgagcaagaggcctcacagcgggaggacagctacgaggagaccat tcgtgaccttacacagcggctgaaggatgctgaaaaccgtgccactgaagctgaaaggacagtatccaaattgcagaaag aagtcgacaggttggaagataccgttgaaatagaaaaaagaaaagcaaaagaataccaagaagagatggaacaacttact acagacttagagaatatgtag |
|
| Transcript ID | pfu_aug2.0_121.1_03673.t3 |
| Definition | - |
>pfu_aug2.0_121.1_03673.t3 atggacgccatcaagaagaagatgattgcgatgaaaacggagaaagagaatgctcttgaccgcgcagagcagctcgaaca aaaattaagggatacagaagaagagaagacaaaggttgaagacgaattaagtgctcttcaaaagaaacactcgaacttag aaaacgaattcgattccatcaacgagaaatatcaggaagcacaaactaagttagaagcggcagagaaggcagcatccgag acgctgaaggataaaatgcaatgtctcagggacgaaaaggacaaattactagatgagaatgaaaccttaactaaaaagtg cgaagcggagagggcgagaagtgaagcagcagaacaagaggttcaaggtttgaacaggaggatacagctgttagaggaag acttagaaagatctgaagaaagattacagtctgccacagaaaaattagaggaggcttctaaagctgcagatgagagtgaa agagcctgtcgtagtttaacaaagaagtgccagatggatgacgataggatagaggtattagaatcacaagtaaaacagac agattttatagtccgtgatacggaacaaaaatacgatgagagcagtttggatgatggtaggatagaggcattagaatcaa accttaaacagacagaatttgtaaccaatgaggcggaacaaaaatatgaagaggtatggcactacccaaaagatggagac tcctctactctttggtggtgaggacgtaaagttttagagagtagaaatgtctctgatgatgagagaatagatgccctgga acagcaactgaaagaagctaaatatgttgccgaggatgcagatagaaaatatgatgaggtgacaataatgcttgtaccta gaatcatcactaggaacagcatgacaacttctcttgtgcaattgtacataaaccgcaaggtcttggaaaacctgaacaat gcatcagaggagaggtcagacgtgctggagaaacagttatctgaggccaaatggatcgcagaggaagcagacaaaaaata tgatgaggcagcacgtaaacttgctatcacagaggttgaccttgagcgtgccgaagctcgtttggaggcagctgaggcta tttcaaattctgaaatagataatatgatagaaaatgcttcatttgaattgttgaggtgtgtgtatgctgcacggaaatgt atgatccttgaaactgaattagagaagacagaaatgagatgtgaacaagcagaaagtaagtgcaaggccttagaggagga attacattgcacctcttactccctgaaatcacttgaacaaaatgaatcgcagggtaaggttgctctcctttgtcgacctc ctattgggcccaatcatgccatggaagctacagtacatggcacactgtgtaaatccatgtctcttcacctttccagcaaa attattaaccttgaagaagagctgacagttgtgggtgccaatatcaaaaccctacaggtccaaaatgaccaggtaaggaa aattttggaattggaagaggagcttaaagtggtgggaaacaacatgaaatctttggagatttccgagcaagaggcctcac agcgggaggacagctacgaggagaccattcgtgaccttacacagcggctgaaggatgctgaaaaccgtgccactgaagct gaaaggacagtatccaaattgcagaaagaagtcgacaggttggaagataccgttgaaatagaaaaaagaaaagcaaaaga ataccaagaagagatggaacaacttactacagacttagagaatatgtag |
|
Protein
| Protein ID | pfu_aug2.0_121.1_03673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_121.1_03673.t1 MDAIKKKMIAMKTEKENALDRAEQLEQKLRDTEEEKTKVEDELSALQKKHSNLENEFDSINEKYQEAQTKLEAAEKAASE TLKDKMQCLRDEKDKLLDENETLTKKCEAERARSEAAEQEVQGLNRRIQLLEEDLERSEERLQSATEKLEEASKAADESE RACRSLTKKCQMDDDRIEVLESQVKQTDFIVRDTEQKYDESSLDDGRIEALESNLKQTEFVTNEAEQKYEEVWHYPKDGD SSTLWWXGRKVLESRNVSDDERIDALEQQLKEAKYVAEDADRKYDEVTIMLVPRIITRNSMTTSLVQLYINRKVLENLNN ASEERSDVLEKQLSEAKWIAEEADKKYDEAARKLAITEVDLERAEARLEAAEAISNSEIDNMIENASFELLRCVYAARKC MILETELEKTEMRCEQAESKCKALEEELHCTSYSLKSLEQNESQASQREDSYEETIRDLTQRLKDAENRATEAERTVSKL QKEVDRLEDELLSEKERYKAISDELDQTFAELAGY |
|
| Protein ID | pfu_aug2.0_121.1_03673.t2 |
| Definition | - |
>pfu_aug2.0_121.1_03673.t2 MDAIKKKMIAMKTEKENALDRAEQLEQKLRDTEEEKTKVEDELSALQKKHSNLENEFDSINEKYQEAQTKLEAAEKAASE AEQEVQGLNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERACRSLTKKCQMDDDRIEVLESQVKQTDFIVRDTEQ KYDESSLDDGRIEALESNLKQTEFVTNEAEQKYEEVWHYPKDGDSSTLWWXGRKVLESRNVSDDERIDALEQQLKEAKYV AEDADRKYDEVTIMLVPRIITRNSMTTSLVQLYINRKVLENLNNASEERSDVLEKQLSEAKWIAEEADKKYDEAARKLAI TEVDLERAEARLEAAEAISNSEIDNMIENASFELLRCVYAARKCMILETELEKTEMRCEQAESKCKALEEELHCTSYSLK SLEQNESQGKVALLCRPPIGPNHAMEATVHGTLCKSMSLHLSSKIINLEEELTVVGANIKTLQVQNDQVRKILELEEELK VVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDRLEDTVEIEKRKAKEYQEEMEQLT TDLENM |
|
| Protein ID | pfu_aug2.0_121.1_03673.t3 |
| Definition | - |
>pfu_aug2.0_121.1_03673.t3 MDAIKKKMIAMKTEKENALDRAEQLEQKLRDTEEEKTKVEDELSALQKKHSNLENEFDSINEKYQEAQTKLEAAEKAASE TLKDKMQCLRDEKDKLLDENETLTKKCEAERARSEAAEQEVQGLNRRIQLLEEDLERSEERLQSATEKLEEASKAADESE RACRSLTKKCQMDDDRIEVLESQVKQTDFIVRDTEQKYDESSLDDGRIEALESNLKQTEFVTNEAEQKYEEVWHYPKDGD SSTLWWXGRKVLESRNVSDDERIDALEQQLKEAKYVAEDADRKYDEVTIMLVPRIITRNSMTTSLVQLYINRKVLENLNN ASEERSDVLEKQLSEAKWIAEEADKKYDEAARKLAITEVDLERAEARLEAAEAISNSEIDNMIENASFELLRCVYAARKC MILETELEKTEMRCEQAESKCKALEEELHCTSYSLKSLEQNESQGKVALLCRPPIGPNHAMEATVHGTLCKSMSLHLSSK IINLEEELTVVGANIKTLQVQNDQVRKILELEEELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEA ERTVSKLQKEVDRLEDTVEIEKRKAKEYQEEMEQLTTDLENM |
|